Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01975 AGAGTGGCAACCCTTGTTCCTGTTCCATCCATGTCATCCTCGATAGATTCATCCCTTACAGAAACACAAATAACTGCAGAAGATCAAGTTCCAAAGATTGAACTGCTAACATGGACCGATGATGAGTATGATGGTGTTATTGTGGAAATGGACAAGCCTATGGATTCTGCAACCTTTTTGTCTATCCTCAGGGCTTCAATTTCACACTGGAAACAGCTGGGCAAGAAGGGTGTTTGGATAAAATTGCCTATTTATCTGGCCAGTCTAGTTGAAGCTCTAGTTCAGGAAGGATTTTGGTATCACCATGCAGAACGAAAATATTTAATGCTTGTGTATTGGATTCCTGCCTCTGCAGATACTATTCCAGCAAATGCCACACACCGCGTGGGTGTCGGATCATTTGTCGTAAATGAAAAACAAGAGGTCCTAGTGGTTCAAGAAAAGACTGGACATTTTCAAGGAAGTGGAGTCTGGAAATTCCCTACCGGCGTTGTTGATCAGGGAGAAGATATTTGTGCAGCAGCAGTGAGAGAGGTCAAGGAAGAAACAGGAGTTGATGCTGAATTTCTGGAAGTATTGGCATTCAGACAAAGTCACATGTCATTCTTTGAGAAGTCAGATCTTTTCTTTGTGTGCTTGCTGCGCCCTCTTTCTTCTGACATTCAAATACAGGAGCTGGAGATAGAGGCTGCAAAGTGGATGCCATTTGATGAGTACGCAGCCCAGCCAATTATGGAAAAGTATGAGCTTATGAAGTACATCAATAATATATACTTAGCAAAGATTGATGGGCAATATTCTGGATTTACTCCTGTATCTACTGCGCCAAACTTCTCTAAGAAAAATATCTATCTTTATTTGAATGCGGGTGGCCTGAAGAAGAGCAATTCTTTGTAA 897 0.4169 RVATLVPVPSMSSSIDSSLTETQITAEDQVPKIELLTWTDDEYDGVIVEMDKPMDSATFLSILRASISHWKQLGKKGVWIKLPIYLASLVEALVQEGFWYHHAERKYLMLVYWIPASADTIPANATHRVGVGSFVVNEKQEVLVVQEKTGHFQGSGVWKFPTGVVDQGEDICAAAVREVKEETGVDAEFLEVLAFRQSHMSFFEKSDLFFVCLLRPLSSDIQIQELEIEAAKWMPFDEYAAQPIMEKYELMKYINNIYLAKIDGQYSGFTPVSTAPNFSKKNIYLYLNAGGLKKSNSL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01975 298 ProSitePatterns Nudix box signature. 163 184 IPR020084 GO:0016787
Vimu7g01975 298 Gene3D - 33 118 - -
Vimu7g01975 298 ProSiteProfiles Nudix hydrolase domain profile. 126 258 IPR000086 -
Vimu7g01975 298 FunFam nudix hydrolase 2 33 119 - -
Vimu7g01975 298 Pfam Nudix hydrolase domain 36 114 IPR040618 -
Vimu7g01975 298 FunFam Nudix hydrolase 8 128 266 - -
Vimu7g01975 298 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 86 104 IPR003293 -
Vimu7g01975 298 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 212 236 IPR003293 -
Vimu7g01975 298 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 124 142 IPR003293 -
Vimu7g01975 298 CDD Nudix_Hydrolase_12 127 258 - -
Vimu7g01975 298 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 128 260 - -
Vimu7g01975 298 PANTHER NUDIX HYDROLASE RELATED 11 292 IPR003293 -
Vimu7g01975 298 Pfam NUDIX domain 127 242 IPR000086 -
Vimu7g01975 298 SUPERFAMILY Nudix 94 252 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01975 Vimu-Chr7 17818870 17821341 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01975 K26956 - gmx:100778567 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01975 7 17818870 17821341 Vimu2g01213 2 8114031 8119183 PCT