Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01969 ATGTGGATCCTATTTACTTTGTCGCATTCTGATTCCCTAAACCTGATATCCCTTTTCTCCTTCGGCTTCAATTGGCAGAATGTTCATCAAGGACATGTCACCGAAACTTTAATGCGGTTTCTTAAAGCAAGGGACTGGGATCCTTCCAAGGCCTATAAAATGAAACCGATTGTTCCTGCTGATTTATATAGATCAGTGCGTGATTCACAGCTCCTAGGTTTGTCTGGTTACTCCAAAGAGGGTCTGCCTGTCTTTGCAATCGGTGCTGGGCTTAGCACATTTGACAAAGCATCTGTCCATTATTACGTGCAGTCTCACATTCAAATTAATGAATATCGTGACCGTATAATCTTGCCTTCTGCATCAAAGAAGCATAAGCGTACTATTACCACTTGTATAAAGGTTTTAGACATGACCGGTCTGAAGTTATCAGCCCTGAATCAGATTAAGTTGTTAACTATTATATCATCCATTGATGATCTGAATTACCCTGAGAAGACAAATACTTATTACATTACAAATGCTCCATACATATTTTCAGCTTGTTGGAAGGTTGTGAAGCCACTTTTACAAGAGAGAACAAGAAGAAAAATACAGGTTTTACCCGGTTGTGGTCGAGATGAGCTGTTGAATGTCATGGATTACTCGTCGCTACCACATTTTTGTAAAAGAGAAGGCTCCGGATCATCCAGACATTCAGAAACTGGAAGTGAAAATTGCTATTCTTTGGATCATCCCTTCCATCAAGAGCTTTACAACCACATCAAGCAGCAAGCCAGACTCCGTGAAGCTGTTGCACCCATCAAACACGGCTCATTTCATGTGGATTTTCCAGAACCTCCTGATGATGAAGTTGAGATTGCCAAGACTATAGAGTCAGAGCTACATAAGTATGAGAACGGCAATGGTGTCTAA 915 0.4087 MWILFTLSHSDSLNLISLFSFGFNWQNVHQGHVTETLMRFLKARDWDPSKAYKMKPIVPADLYRSVRDSQLLGLSGYSKEGLPVFAIGAGLSTFDKASVHYYVQSHIQINEYRDRIILPSASKKHKRTITTCIKVLDMTGLKLSALNQIKLLTIISSIDDLNYPEKTNTYYITNAPYIFSACWKVVKPLLQERTRRKIQVLPGCGRDELLNVMDYSSLPHFCKREGSGSSRHSETGSENCYSLDHPFHQELYNHIKQQARLREAVAPIKHGSFHVDFPEPPDDEVEIAKTIESELHKYENGNGV 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01969 304 SMART sec14_4 59 227 IPR001251 -
Vimu7g01969 304 CDD SEC14 66 221 IPR001251 -
Vimu7g01969 304 Gene3D - 23 55 - -
Vimu7g01969 304 Pfam CRAL/TRIO, N-terminal domain 25 54 IPR011074 -
Vimu7g01969 304 Pfam CRAL/TRIO domain 70 221 IPR001251 -
Vimu7g01969 304 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN 24 303 - -
Vimu7g01969 304 SUPERFAMILY CRAL/TRIO N-terminal domain 27 54 IPR036273 -
Vimu7g01969 304 Gene3D - 58 261 IPR036865 -
Vimu7g01969 304 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 59 219 IPR001251 -
Vimu7g01969 304 SUPERFAMILY CRAL/TRIO domain 61 258 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01969 Vimu-Chr7 17772997 17775964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01969 25 304 Acyl Lipid Metabolism Gene Families AT5G47730 66.779 4.17e-147 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01969 K26544 - gmx:547507 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01969 7 17772997 17775964 Vimu2g01247 2 8321720 8326407 PCT