Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01831 ATGCAACGCAATAGTACTACTGAGTTGGAGGAAGGAGAGGCTTTCTATTGTTATGAGGATGAGGATGATGACAACATTGACCTTGATTCTCTCTCTTACATTGATGAGAGGATTCAGCATGTTCTGGGTGATTTCCAAAAGGAATTTGAAGGAGGTATTTTTCCTGAGCGTTTGGGTGCAAAATTTGGTGATTATGGCTCCTTTTTACCCACCTATGAACGCTCGCCTCGGTTACGATCAGGTCCAAAGGCTCCAGAAAAACCCAACAGTTCACAAAATATTCCCAGCAATATCCACACCACGGCTGCAATTTATAACTCAAGAGCACCTCCAAATACAACTCCTTCCACGAGGCTTGGAACTGCTTCCCCTATCGTTCTTCCATCTCGAGATACAGGAGTACCTTCAGAGAAGAACACAGGCATTTCCTCGAATAGAGTAACAGGGAAATGCAGTTTGAAAGAGGACTTTGCAAATAAGGCAGAAAAGTTGACCAAGCAAAGAACGCCACAAATCAAAGTAAAATCAGATAACTTAGCAAAAAAGAATGCTGCAATTTACAGTGGACTTGGGCTTGATGACTCTCCATCCTCTTCGACAGAAAACAGCCAAAAGGAAGGTGAAGATTCGCCACATGTATCTCAAGAGATGCCTGAAGAATCTTGCACTAGCATTATTCAGGTTATGACTTCTTTCACTATCCCTGGAGGTGTGCTAATATCACCTCTACATGACAGTCTACTCAACTTGATTAGAAAGGGCAAAGCCCTTAGAGACAGTAGACCCATGTCTTCTCTTAATGGTCATCAGGAGCATTATTCCATGTCTACTGATGAATCAGATTCCTTGGTTGGGGATTCACATTTGTTGAAGAAAAGGAAACTGACAGCGGTAGACCAAAGTGAAAAGCATCATATGAATGGTAACTGTTATGAGAATGACATGACATCTCATACGAAGAAAAGATTAGCAAATAGATCTCCAGATCGAAAGGACTTTCTGTCTAATGGTCTGAGATGCACACCACTGTCAAGTTCAATTTGTGATGCTGGTGAAACAGCTGAAGTCGCTGGTAAGGCTATTGAAGTATCCAAGGAGGTCAATAAAAATGGTGTGGAATGTAGAATGGATTCCATAGAAGCAGTGAAGGAGGTTTCATTGGAGTCAATATCTGATCAGGATTTTGACAAGGTTGTGAAACGAAATACAGGACGTAGCTTTGGGAAAAAAGTGTTAGAGCATAAAATGGAAATGTCTCAGGATAACAATTCTGCTGATCCTAAGAATAGTAGAAATTGTAACACTTCTGCTATTTCGAAAAGGTTTAACTCTGATGAAATGAAACGTAAGGTGGATCAAGATACTAAAAAATTTGAGACTAATCAGACCAAGGTAAAATCTGCAAGCAAGAACAACTTAAAAGGCGAACAGGGACCTGTAAAAGTTATGGCCGATGCCAAAAAAGGTGTCATTGGTTCTAGTAATAGAGCAAGGGTAAATGATAGAAAGAGTACTGGCATCGGTGTTACTTCTTCTAAAATTGAAATGCATAAAATGAAACTGATGGGTAATAAGGTGAGAGATTGTGACAGAGGTTCACTGAAAAGAAAAAAATTACAACTGAAGCTTGATGGAATAGATCCAACTGATGGGCCTCCCCTTAACAAGGATACAGTAAATGCTGACCTTTACCATGCTAAAAAGAGTGCAAATGAGGTTAAAGTAAAGGAAAAACCAAGTGGCAATAAAGTTGCTTATCAGTTGTCTGCTGTGCCATGCGTAAAAGATGCTCCAGGCACATTTCCTGTTGCTGAAAATAAACCCACTTCTGAGATGGCTCTGTCAGCAGCAGCAGCACCTCAACTTATTGAAGAAGATTGGGTTTGCTGTGACAGTTGCCAGAAATGGCGGCTTCTACCTATGGGTTTAAAGCCAGAGCAGCTTCCAGAGAAATGGTTGTGTAGCATGCTATATTGGCTGCCTGGAATGAATCGGTGTAACATCAGCGAGGAGGAGACAACAAAATCACTTTATGCTTTATATCAAATGCCGATTTCTGAGGGTCAAAATAACATGCAAAGCCATGTCACTGAACCCAAAATTGGAGTGAAGTCTGTTGATACTATACAACTTTTCCATCTTGACAAAAACTCCAGTTCTGATGTAATGCTTGATCGGGGAAACAAGAAACATGGTATTAATGAAAAGGCAAAGCCAGGACTCAACATTGACAGGCATCAGTTGTCAAATACAGTAAAGAAGGGTCAAGAGTCAAATGTTAAAAACAGAAGCTTGAATGACATGAATCAGCTGTCTGCAAACTCAAACCGTATGAAGAAATCTAATTCTCAAAATTTGAACAGGTTGAACAATTTCAAAGAAGATAAAAAAGCGCTTAAGGCAAAAGAATATCAAATTAATGGAGGTGACAAACAGGTTAGATTGAAGCGTAAGATGGAGGATAATCAACATGGATCTGGAACTCATAAGAAATCTAAGATTGAAGTTGTTGGCAATGCTGATAAACATCTGAAACACGGTATGGACTATAAAAAGTTAGGTCTAAACTCAAGAAATGACTTACCAACAAAGGCTAGTGGGGAAAATACAACGAAATATGATGATTATTGTTCGTCTGACGATAACAAGTTTGTCGTTCCGGTAAAGAAGGGAGATGGGGCACAGTTTTCATCTGATGATGGTTCGTTGGATGCTACAAACAGTAGGCAAAGTGGTTCGGTCAAAGAAAGAAAAATGAGTGACTGGCGGGATAATGAGAAACATGACGAAACATTGTATATGGAAGGTGACATGCATCGTGTTAAAAACAATGTAAATAAGAAACAGAAGTATACAGTTTTGAATACAGAGGCAAAACCAGTAATTGAAAGTGATGACGAATTTATTAAAGAAAGTGAGATGAAGCGTGCTTTCTTGCCAGCCAGCAGGGACAAAATGTCTACTGGGACAGAGGTGAAAAGTGATATCAATATGGCCCGCCAGCCTAGAAAGCACAAAAAAAGTGTTGCTTCTTACCAAGCTTTGGATTGTTTTGATCCATCAGGTGGGGATTTAGGCTCTGGAAAATTTTCATTGGCAGCAACTTCAAGTTCTTCTAAGGTTTCTGGGTCTCGCGAAGCTAGAACTAAGCTTGAAAAGGCCATAGGCTCACCAGTAGAATCTGTCACCTCATCACCTTTGAGGACTTCCAACACCGAGAAATGTATTTATGCTGCAGGGTTGGACACATCAGAAAAAGATGATGCTAGAAAAGGTGGTTTATCAATAAAAAAATTAGATAGTAGGGAGAAAAAGTTATCAGTAAAAAAGGAGAGAGTTTCACTTGACATACATCTTGCACGTGTTAATTGTGGCAGTGGTTCACATCATGAAGAGAAAATGAACAAGAGTAATCAGGAAAATGCACTTTCTTGGCAGAAGTCTGGTAGGCTCACATCATTACGGGTCAAGCAAAAGGTTAGAACTTCTGGTTCTGAGGTGAGTAGGGATAAGATGAAGGTTTCAGTATCAGATAATGATTTTTCCAAAAATGGTGTGAGTTATGAGTCAGCAGTTCATCCTAATAATCATACTTCTGGTACTGAGACAAGTCATGATGATAAGCACGTCTTTCTGAAGTGTAAACCCAATATTGACAACCTTAGCAAGCAAAATCCTTCAAGGCATTGGTCAGATGAAACTGGAAAACAAACTGAGCCAACACAAAATGATTTTGGGAATCCAATTTTGAAAAGGGAACCGTTACATTTGGGTTCTAGAACTGCACCCAAATCGCAAAAAGGAGATATGTCTATTGGGCATCCGGTCCATGCATCTGGCAATGGTGATGTTCCTAGGCTTGTGAGAAATGCAGTTGATGTTAGTTGCAAGGCTGGAGATGATCACAGTTTAGGAAGTTTAGTACCTGACAGACAGCTCAGTGGGTCAAGTCCCGTGACAACAAATTCTAGCCAAACTGCCTCTGGCGTTCTGGAAGAAGCCACAAAGCTAAAGGATTCTGCAGATCATTATAAGAACTCTGGTTTTGAGTTTGAAAGTAACGAGACTTATTTTAAAGCTGCCTTAAAGTTTCTGCACGGAGCATCACTTATAGAAAAATCCCACAGTGAAATTAGCAAGCAGGGAGAGATGAATCAAATGGAAATTTATGCTGCTACAGCTAAACTTTTTGAATCCTGTGCCCATAAATATGAAAGACGCCAAGAAATGGCCGCAGCTGCCTTGGCCTATAAATGCATGGAGGTGGTATACATGAGATTGGTTTACAATAAACATTCTACCATAAACAGGGATCGTGATGAGTTAAAATCAATTCTACAAATGGTTTCTCAAGGTGAATCTCCTTCCTCTTCTGCATCTGATATTGATAATTTAAATAACGTGGGGGCAGTGGATAGGACTACTTTGACAAGGGGTTATAGTACTCTTGCTGCTAACAATCAAGTCATATCTGCTCAGAATCGCCCAAATATTGTCAGGCTTCTTGATTTTACTCAAGACATAAATTTTGCAATGGAGGCTTCCATAAAATGCAAGAGCACTTTCATGGCTGCTAAGTTGAACATGGATGAAGCACGGAATAGGGATTGCATAACTTCGATTAGGAAGGTTATTGATTTCAGCTTCCAAGATGTAGATGAGCTTGTACATCTGGTGATGATTGCAACAAAAGCAATGACTCGAGCTGGTCTTGGTGGTGTTAGAGATTAA 4731 0.3993 MQRNSTTELEEGEAFYCYEDEDDDNIDLDSLSYIDERIQHVLGDFQKEFEGGIFPERLGAKFGDYGSFLPTYERSPRLRSGPKAPEKPNSSQNIPSNIHTTAAIYNSRAPPNTTPSTRLGTASPIVLPSRDTGVPSEKNTGISSNRVTGKCSLKEDFANKAEKLTKQRTPQIKVKSDNLAKKNAAIYSGLGLDDSPSSSTENSQKEGEDSPHVSQEMPEESCTSIIQVMTSFTIPGGVLISPLHDSLLNLIRKGKALRDSRPMSSLNGHQEHYSMSTDESDSLVGDSHLLKKRKLTAVDQSEKHHMNGNCYENDMTSHTKKRLANRSPDRKDFLSNGLRCTPLSSSICDAGETAEVAGKAIEVSKEVNKNGVECRMDSIEAVKEVSLESISDQDFDKVVKRNTGRSFGKKVLEHKMEMSQDNNSADPKNSRNCNTSAISKRFNSDEMKRKVDQDTKKFETNQTKVKSASKNNLKGEQGPVKVMADAKKGVIGSSNRARVNDRKSTGIGVTSSKIEMHKMKLMGNKVRDCDRGSLKRKKLQLKLDGIDPTDGPPLNKDTVNADLYHAKKSANEVKVKEKPSGNKVAYQLSAVPCVKDAPGTFPVAENKPTSEMALSAAAAPQLIEEDWVCCDSCQKWRLLPMGLKPEQLPEKWLCSMLYWLPGMNRCNISEEETTKSLYALYQMPISEGQNNMQSHVTEPKIGVKSVDTIQLFHLDKNSSSDVMLDRGNKKHGINEKAKPGLNIDRHQLSNTVKKGQESNVKNRSLNDMNQLSANSNRMKKSNSQNLNRLNNFKEDKKALKAKEYQINGGDKQVRLKRKMEDNQHGSGTHKKSKIEVVGNADKHLKHGMDYKKLGLNSRNDLPTKASGENTTKYDDYCSSDDNKFVVPVKKGDGAQFSSDDGSLDATNSRQSGSVKERKMSDWRDNEKHDETLYMEGDMHRVKNNVNKKQKYTVLNTEAKPVIESDDEFIKESEMKRAFLPASRDKMSTGTEVKSDINMARQPRKHKKSVASYQALDCFDPSGGDLGSGKFSLAATSSSSKVSGSREARTKLEKAIGSPVESVTSSPLRTSNTEKCIYAAGLDTSEKDDARKGGLSIKKLDSREKKLSVKKERVSLDIHLARVNCGSGSHHEEKMNKSNQENALSWQKSGRLTSLRVKQKVRTSGSEVSRDKMKVSVSDNDFSKNGVSYESAVHPNNHTSGTETSHDDKHVFLKCKPNIDNLSKQNPSRHWSDETGKQTEPTQNDFGNPILKREPLHLGSRTAPKSQKGDMSIGHPVHASGNGDVPRLVRNAVDVSCKAGDDHSLGSLVPDRQLSGSSPVTTNSSQTASGVLEEATKLKDSADHYKNSGFEFESNETYFKAALKFLHGASLIEKSHSEISKQGEMNQMEIYAATAKLFESCAHKYERRQEMAAAALAYKCMEVVYMRLVYNKHSTINRDRDELKSILQMVSQGESPSSSASDIDNLNNVGAVDRTTLTRGYSTLAANNQVISAQNRPNIVRLLDFTQDINFAMEASIKCKSTFMAAKLNMDEARNRDCITSIRKVIDFSFQDVDELVHLVMIATKAMTRAGLGGVRD 1576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01831 1576 MobiDBLite consensus disorder prediction 893 926 - -
Vimu7g01831 1576 MobiDBLite consensus disorder prediction 1218 1285 - -
Vimu7g01831 1576 MobiDBLite consensus disorder prediction 853 876 - -
Vimu7g01831 1576 MobiDBLite consensus disorder prediction 188 221 - -
Vimu7g01831 1576 MobiDBLite consensus disorder prediction 133 147 - -
Vimu7g01831 1576 MobiDBLite consensus disorder prediction 1162 1177 - -
Vimu7g01831 1576 PANTHER CW-TYPE ZINC FINGER 4 1567 - -
Vimu7g01831 1576 MobiDBLite consensus disorder prediction 1036 1067 - -
Vimu7g01831 1576 MobiDBLite consensus disorder prediction 85 123 - -
Vimu7g01831 1576 MobiDBLite consensus disorder prediction 73 147 - -
Vimu7g01831 1576 MobiDBLite consensus disorder prediction 1158 1180 - -
Vimu7g01831 1576 ProSiteProfiles Zinc finger CW-type profile. 621 674 IPR011124 GO:0008270
Vimu7g01831 1576 MobiDBLite consensus disorder prediction 1299 1328 - -
Vimu7g01831 1576 MobiDBLite consensus disorder prediction 297 318 - -
Vimu7g01831 1576 MobiDBLite consensus disorder prediction 859 873 - -
Vimu7g01831 1576 Pfam CW-type Zinc Finger 627 672 IPR011124 GO:0008270
Vimu7g01831 1576 MobiDBLite consensus disorder prediction 899 913 - -
Vimu7g01831 1576 Gene3D - 619 676 - -
Vimu7g01831 1576 MobiDBLite consensus disorder prediction 1309 1328 - -
Vimu7g01831 1576 MobiDBLite consensus disorder prediction 263 282 - -
Vimu7g01831 1576 Coils Coil 782 802 - -
Vimu7g01831 1576 MobiDBLite consensus disorder prediction 260 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01831 Vimu-Chr7 16653228 16660978 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01831 - - gmx:100793863 2051.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01831 7 16653228 16660978 Vimu7g01831 7 16653228 16660978 ECH
Vimu7g01831 7 16653228 16660978 Vimu10g00223 10 1350071 1359483 PCT