Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01763 ATGACTGCACACAGTCAGAATATTGGGCCCCTGTCGAAATCTAAATTAAATAACTTGGTCAAAATTTCTCTTGAAACAGAAAATATAAGTAAATCTCTTTTGACCGAAAGTGTGTCTGTACTTAATAAAGATGAACCAAACTCCTCTAGTGGAAAATCTGAACTTGATGTGGCAGATGAAGAGGAACCAGTCATTGATACCAATGAACACATTACAGAAGGTGAATTGTGGCATGAACTGGAGAAGGAACTTGAAAAACATAATATGTTGAACATCCTGACTCAGGTAGAAGAAGCAGATACAGAAAATGAGATAATTGAGGAAGAAGATCAGCTTGTTAATGCTAGCAATTCAACCTCAACATCTGGCCTTGTAGATAGTTGTTGTCTTTATCCCCCAGGTAAAATTATGCATATTGTCTCTGCACCTTCTGATGAATCTAGTTCAAACTCCAAGGAGGAACATATCAAATTATATGAAACACCAAGACAGCTGTATAGCAAGTTCAGACTTTCAAAAAAAATGATAAATGATCATTACATGCCAACATATAGAACAATGATCCAACTATTAATCCAGCAATTAAAGAAAGATGGTGTCAAATAG 606 0.3548 MTAHSQNIGPLSKSKLNNLVKISLETENISKSLLTESVSVLNKDEPNSSSGKSELDVADEEEPVIDTNEHITEGELWHELEKELEKHNMLNILTQVEEADTENEIIEEEDQLVNASNSTSTSGLVDSCCLYPPGKIMHIVSAPSDESSSNSKEEHIKLYETPRQLYSKFRLSKKMINDHYMPTYRTMIQLLIQQLKKDGVK 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01763 201 MobiDBLite consensus disorder prediction 42 61 - -
Vimu7g01763 201 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 38 197 - -
Vimu7g01763 201 Coils Coil 89 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01763 Vimu-Chr7 16233682 16235039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01763 69 198 Acyl Lipid Metabolism Gene Families AT4G16070 40.000 1.57e-24 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01763 - - gmx:100801263 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01763 7 16233682 16235039 Vimu7g01763 7 16233682 16235039 ECH
Vimu7g01763 7 16233682 16235039 Vimu10g00159 10 918371 923267 PCT