Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00159 TTGAAGCGGTTTACACGGCGCGTGGCCGATCTCCGTCAGCTCATGGCGGCGGGGACAATGGCGACGGCGGCCGGGGCGGCGGTGATGCTGTTTTATGTGCTGAGCCGGCGGCTGTCGCGGAAGGCGGAAGAGGACAGCGAGGATCACGGAGGCGGCGGCGACGTGTCGAAATCGAGCAGATCGGTGCGCCGGAGAAGGCTTTCGAGGCGGCCGGCGCAGGCTCCGGCGACGCTGCTGGAGTCGATCGGAACGCTGTCGGAGACTTTGAGGTTCACGTATTCCGAGACCTTCGGGAAGTGGCCAATCGGCGATTTGGCCTTCGGAATCAACTACTTTATGCGCAAGCAGAAAGGTGCAGGCTTTTGGGGGGATTCTGACTTTGGGAATAATGGGCGCGTGTGTGTAATGGTTTGCATTTTGCAGGGTAATTTGGCAGTTGCAAGTGTCTATGCTGGGAGTGATTCTGTGCAGCTCAAAGGGGATGAGATAATTGTGGAGCTGTACGAGTTGTTGAGGCTTTTGACTTTGTGTATGCTTTTCTCTAAGAAGCCATTTCCTGTGTTTTTAGATTCTGCTGGGTTTTCCCTTGATGATGTGCTCATTCAGAAACCGAAAGCTGGGCTTCTGAAGCCTGCATTTACGATTATATGCGATACACAATCAAAATGTTTACTTCTACTGATCCGGGGTACTCATAGCATAAAGGACACCCTGACAGCTGCAACTGGTGCTGTAGTCCCTTTTCACCATTCAGTTTTAAATGACGGTGGGATCATCAACTTGGTTTTGGGATATGCACATTGTGGCATGGTTGCTGCTGCTAGATGGATTGCAAAGCTTTGCACTCCTACCCTACTTAAGGCTCTTGAGGAATTTCCAGACTTTAAAGTCAAGATTGTTGGGCACTCACTTGGTGGTGGTACTGCTGCACTATTGACCTATATTCTTAGAGAGCAGAAAGAGTTCTCTTCAAGCACATGTGTCACTTTTGCTCCAGGCATAGTTAATGGTTTTGTTACAGGTTTAGTACTTAATAGCAAGCATGCCTATTTTGCATTAGAATCTGCCTGTATGACATGGGAGTTAGCAGAATCAGGAAAACACTTTATTACAACCATTATAAATGGTTCTGATTTGGTGCCAACATTTTCAACTTCATCCATTGATGATCTCCGATCTGAGGTCACTGCATCATCTTGGTTGAATGATTTACGGGATCAGGTTGAACATACCAAGGTCCTGAATGTTGTCTACCGATCTGCAACTGCACTTGGATCTCGCTTACCATCTATTTCCAGTGCAAAAGCTAGGGTGGCTGGTGCTGGTGCTATTCTATGGCCAGTAACCAGTGGCACACAGGTTGTGATGAGGCGTGCACAGAGTGTTGCTGAGGCTGTTGTCAGAACTCGGTCATCACTGTCATCATGGTCTTGCATGAGTGCACGCCGCAGAAATGTGGGTCCATCAGTAAACTCTAAATCAGAGGATTTAACTGAAGCATCTCTAATATCTGCAAGGAACACAGAATCTGTTATGACTGAAGAGGTAGTAATAGAACCTATGCTTAAGGATGAAAATACATCCTCAAGTGGAGGATCTGGCCATGATGACACAGATGAAGAAGAGCCTCTCATTCCTTCTAATCAAGACATCACTGCATCAGCTGTTGAGGAATTAACAGAAGGCCAGTTATGGTATGAGCTAGAGAAGGAGCTTCAAAAGCAGGATAATGTTATGAACATTCATGCTCAAGAAGAAGAGGCCGCAGCAGCAAAAGAGATCACAGAAGAAGAGAGTCAACTTGTTGATGCTGCTGCAGAATGCAGTAGCAGTTCAATCACTACATCAGACAACTTGGATAGCCATCGATTTTATCCCCCTGGCAGGATCATGCATATTGTTCCTGTACCTTCATCGGATGAATCAAATTCAAATTCTGATGACCCTATAGAAGAACATGTCTGCTTATATGAAACTCCCAGAGAGCTGTACAGCAAGCTCAGACTTTCAAAAACCATGATAAATGATCATTACATGCCAATGTATAAGAAGATGATGGAACTATTAATACGAGAACTAGAGAAAGATAGCAACTTTCTTTTTTTTATCCTTGCTGGCTACTGCCATGCTGTAGAAAATTTTGGTTGTATGAATTTGATTCTTTTATGGACCTCAGCTGATACGTACAGTGATGCTCAGGTATTCACTGTTTACGATGTACATGCATTATGTGGTCAACTTCGTATTCAAGCTTGA 2256 0.4557 MKRFTRRVADLRQLMAAGTMATAAGAAVMLFYVLSRRLSRKAEEDSEDHGGGGDVSKSSRSVRRRRLSRRPAQAPATLLESIGTLSETLRFTYSETFGKWPIGDLAFGINYFMRKQKGAGFWGDSDFGNNGRVCVMVCILQGNLAVASVYAGSDSVQLKGDEIIVELYELLRLLTLCMLFSKKPFPVFLDSAGFSLDDVLIQKPKAGLLKPAFTIICDTQSKCLLLLIRGTHSIKDTLTAATGAVVPFHHSVLNDGGIINLVLGYAHCGMVAAARWIAKLCTPTLLKALEEFPDFKVKIVGHSLGGGTAALLTYILREQKEFSSSTCVTFAPGIVNGFVTGLVLNSKHAYFALESACMTWELAESGKHFITTIINGSDLVPTFSTSSIDDLRSEVTASSWLNDLRDQVEHTKVLNVVYRSATALGSRLPSISSAKARVAGAGAILWPVTSGTQVVMRRAQSVAEAVVRTRSSLSSWSCMSARRRNVGPSVNSKSEDLTEASLISARNTESVMTEEVVIEPMLKDENTSSSGGSGHDDTDEEEPLIPSNQDITASAVEELTEGQLWYELEKELQKQDNVMNIHAQEEEAAAAKEITEEESQLVDAAAECSSSSITTSDNLDSHRFYPPGRIMHIVPVPSSDESNSNSDDPIEEHVCLYETPRELYSKLRLSKTMINDHYMPMYKKMMELLIRELEKDSNFLFFILAGYCHAVENFGCMNLILLWTSADTYSDAQVFTVYDVHALCGQLRIQA 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00159 751 SUPERFAMILY alpha/beta-Hydrolases 197 386 IPR029058 -
Vimu10g00159 751 Pfam Lipase (class 3) 226 384 IPR002921 GO:0006629
Vimu10g00159 751 Gene3D alpha/beta hydrolase 197 420 IPR029058 -
Vimu10g00159 751 Pfam Lipase 3 N-terminal region 66 115 IPR005592 GO:0016042
Vimu10g00159 751 MobiDBLite consensus disorder prediction 43 61 - -
Vimu10g00159 751 MobiDBLite consensus disorder prediction 43 72 - -
Vimu10g00159 751 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 20 696 - -
Vimu10g00159 751 MobiDBLite consensus disorder prediction 522 545 - -
Vimu10g00159 751 CDD Lipase_3 217 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00159 Vimu-Chr10 918371 923267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00159 15 698 Acyl Lipid Metabolism Gene Families AT4G16070 61.592 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00159 - - gmx:100812454 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00159 10 918371 923267 Vimu10g00159 10 918371 923267 ECH
Vimu7g01763 7 16233682 16235039 Vimu10g00159 10 918371 923267 PCT