Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01729 ATGATAATTTCTTTTTACTTAATCTCTCTCCTAATTGGATTTCAGCGTGTCAAGGTATATCGTCTGAATGATGAAGGGAAATGGGACGACCAGGGTACTGGTCATGTCACTGTTGATTATCTAGAGCGATCAGAAGAGCTGGGCTTATTTGTTTATGATGAAGACGATAATGAGACCATACTGTTGCATCGCATCAGTTCTGATGATATTTATCGGAAACAAGAAGATACAATCATCTCATGGAGAGATCCAGAATATGCTACAGAACTGGCACTTAGCTTTCAAGAGACTAGTGGTTGCTCTTACATATGGGACCATATTTGCAATGTGCAGAGGAATATGCATTTTAATACATTAAATAATGAGCCATTTCACAGTGTCAATAGTGAACCAAGGGAGTTGCCTGCTACTGTGGTTGACACTGGCTTTGCAGATCAGTTGCGGCTTACAGAACTAATATTAAGTGATCAAGAGTTTTTTCGGAAGCTGATGGAAGTATTCAGAATGTGCGAAGACTTAGAAAATATTGATGGCCTTCACATGATTTTCAAAATAGTCAAAGGGATTGTTTTGCTAAATAGTCCAGCGATTTTTGAGAGAATTTTTTGTGATGACTTTATAGTGGACATTATTGGTGCCCTCGAGTATGATCCAGAGCTTCCCCATGTTCAACATCATCGTAAATTCTTAAAGGAGCATGTTGTTTTTAAGGAGGCTATACCTATAAAAGACCCAGTTGTGTTGTCAAAGATTCATCAGACATATAGAGTTGGTTTTTTGAAGGATGTTGTTCTGGCTAGATTATTGGATGAGGGTATTGGTGCAAATCTTAACTCCATAATACATTCAAACAATGCCTATGTTGTCTCTTCATTAAAGGATGACAGCACATTTATCCAGGAGTTGTTTGCTAGGCTAAAATCACCCACCACGACTCAAGAATCAAAAAAGAATTTGGTTTATTTCTTGCATGAATTTTGTAGTTTGAGCAAGAGCTTGCAGATGGTCCAGCAGCTTCGGCTTTTTAGGGATCTAATGAACGAAGGCATCTTTGATGTTGTCACCGATGTCTTACAAAGTGAAGACAAGAAGCTTGTGCTAACTGGAACAGATATCCTCATTCTTTTCTTGAATCAAGATCCTAATCTCTTGCGATCCTATTTTGTTCGACAGGAAGGATTTGCCCTTCTAGGACTTTTGGTTAAAGGAATGCTAACAGATTTTGAAGAGAACATGCACTGCCAGTTTCTTGAAATTCTTCGCAATTTATTGGACTCATGCACATTGACTGGATCACAGAGGGACACTATTATTGACATATTCTTTGAGAGGCATTTGGGGCAATTGATTGAGGTTATAACATCATCTTGTCCTTCGGAAAATACTGCTGGTGAAAGTGACAAATCAATAGGTTCTGGGCGAAGAGCTCATTGTCAAAGTGGAACTAAGCCAGAGATACTATCAAACATATGTGAATTACTATGCTTTTGCGTCCTACATCATCCATACAGAATAAAGTATTTTCTTGCTGCTCTGCAGTGTCTAGTTGATTTTGTACTGTGTAACTTTCTTCTTAATAATGTGTTTGAAAAAATATTGCTATTGACACGAAGAGCAGAAAGATACTTAGTTGTTGGTGCTGTCCGGTTTGTACGAACTATTCTCTCGCGTCATGATGAGCATTTGATAAATTATGTTATTAGGAATAATGTTCTCAAACCAATCATTGATGCCTTTGTTTCTAACGGCAATCGCTACAATCTGCTCCACTCTGCTGTTCTGGAGCTTTTTGAGTTTATTAGGAAGGAGAATCTTAAAGCATTGCTGAAATACATAGTTGATTCTTTTTGGGACCAGCTGGTGAAATTTGAGTATTTGGCGTCCATTCACTCACTGAAAGTAAAATATGAGCAGTGTTTGGATAATGGTGGGACAAAAGATGCTGCTACTGTTGTGGACCTTCGTAGACGAAATGATGAGCGTGCTTTGGAGAAAGAAGAAGAACGATACTTTAATGAGGACAGTGATGAGGAGGATATTGCTTCTGCGTCTATTCAGCGGAATCAGAAAGGACACCAGCAACCTAATCTATCCAATGGAGTTGCTTCAAGCTATTCACAGTTAAGTCCAAGGTCACTGGTTGACTATGAGGACGATGAGGACGATGAAGATTACAAACCACCACCAAGGAAGCAGCCTGAAACTTCTGAGGAAGATGATGGGGTACTGGAGTCTCTCAGGCTGAAGAGGAAGTTGCCTTCAAAAGATAAGGAACCTGAACTTGTGAAGAAACAGAAGTTATCAAAGAATTCTAAATCTAAAGATAGTGTCTTTGCTGCCTTGTGTTCAACATTGAGCCAAGCTGCGCTACCTAGTAAGAAAACATCAATCAGCATTCAGACGAGTGCTCGAATAGTTGAGGGAAGGATGGGCTCTAGTGAAAATAATCAGGGAGATGTACAAAGTGTTTCTAGAAGCAGTTCCGATGATAGCAACACTGCAGGAGAAGACAATCACATAGAGAAAGAGGCTGAAGACTCTAGAAACTTTTCCGATTGCTTGCATGCAAAATCAGATAACATACAATTGGGTGGAGAGGAGCGTCCATTGGTTGCCCCAAAGTCCTCACCAGAGATGGCTGTAAATGGATCGTAA 2655 0.3955 MIISFYLISLLIGFQRVKVYRLNDEGKWDDQGTGHVTVDYLERSEELGLFVYDEDDNETILLHRISSDDIYRKQEDTIISWRDPEYATELALSFQETSGCSYIWDHICNVQRNMHFNTLNNEPFHSVNSEPRELPATVVDTGFADQLRLTELILSDQEFFRKLMEVFRMCEDLENIDGLHMIFKIVKGIVLLNSPAIFERIFCDDFIVDIIGALEYDPELPHVQHHRKFLKEHVVFKEAIPIKDPVVLSKIHQTYRVGFLKDVVLARLLDEGIGANLNSIIHSNNAYVVSSLKDDSTFIQELFARLKSPTTTQESKKNLVYFLHEFCSLSKSLQMVQQLRLFRDLMNEGIFDVVTDVLQSEDKKLVLTGTDILILFLNQDPNLLRSYFVRQEGFALLGLLVKGMLTDFEENMHCQFLEILRNLLDSCTLTGSQRDTIIDIFFERHLGQLIEVITSSCPSENTAGESDKSIGSGRRAHCQSGTKPEILSNICELLCFCVLHHPYRIKYFLAALQCLVDFVLCNFLLNNVFEKILLLTRRAERYLVVGAVRFVRTILSRHDEHLINYVIRNNVLKPIIDAFVSNGNRYNLLHSAVLELFEFIRKENLKALLKYIVDSFWDQLVKFEYLASIHSLKVKYEQCLDNGGTKDAATVVDLRRRNDERALEKEEERYFNEDSDEEDIASASIQRNQKGHQQPNLSNGVASSYSQLSPRSLVDYEDDEDDEDYKPPPRKQPETSEEDDGVLESLRLKRKLPSKDKEPELVKKQKLSKNSKSKDSVFAALCSTLSQAALPSKKTSISIQTSARIVEGRMGSSENNQGDVQSVSRSSSDDSNTAGEDNHIEKEAEDSRNFSDCLHAKSDNIQLGGEERPLVAPKSSPEMAVNGS 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01729 884 SUPERFAMILY PH domain-like 15 111 - -
Vimu7g01729 884 MobiDBLite consensus disorder prediction 805 884 - -
Vimu7g01729 884 MobiDBLite consensus disorder prediction 805 831 - -
Vimu7g01729 884 MobiDBLite consensus disorder prediction 685 775 - -
Vimu7g01729 884 MobiDBLite consensus disorder prediction 685 711 - -
Vimu7g01729 884 SUPERFAMILY ARM repeat 297 602 IPR016024 -
Vimu7g01729 884 MobiDBLite consensus disorder prediction 832 853 - -
Vimu7g01729 884 Gene3D - 269 621 IPR011989 -
Vimu7g01729 884 PANTHER ATP SYNTHASE GAMMA-RELATED 16 803 - -
Vimu7g01729 884 Gene3D - 14 129 IPR011993 -
Vimu7g01729 884 Pfam Phosphatase 4 regulatory subunit 3 157 345 IPR006887 -
Vimu7g01729 884 MobiDBLite consensus disorder prediction 724 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01729 Vimu-Chr7 15934955 15951953 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01729 K17491 - gmx:100786790 1501.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01729 7 15934955 15951953 Vimu7g01729 7 15934955 15951953 ECH
Vimu7g01729 7 15934955 15951953 Vimu10g00118 10 656555 672261 PCT