Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00118 ATGAGGGGTCCAACACTGCGTTTTGCTTGCAACAATGTGGTGCGGCATGAACTCTCCTGCTCCTTCTTATGTTTTGCAACTTCTGCACTTCAACCCTCCTCTGTTCCACTTCTGCTATGTGCAGTGCTCACTGCTGATCTTCTGGTGAGTTTTCAGATTTCTAAAGCTGTTCTTTATCCTATGACCCTCTTTGGATCTTCCCTCAGCTTTGCTTTTTTGCTCTGTGGCTTGAGTATCTCTCTTTCGTTTCAGTTGACTCTTCTGTGGTTCTATGTGGCTGTAACCAACAGCTCACGTGTCAAGGTCTATCGTCTGAATGGTGATGGCAAATGGGATGACCAAGGCACTGGGCATGTCAGTGTTGATTATTTGGAGCGATCAGAAGACCTGGGCTTATATGTTTATGATGAAGAAGACAATGAAAACATACTTTTGCATCGCATCTCTCCTGATGATATTTACAGGAAACAAGAAGATACAATTATTTCATGGAGAGATCCAGAATATGCTACTGAACTTGCACTTAGCTTTCAAGTCCCTGGTGGTTGCTCTTACATATGGGACCATATTTGCAATGTGCAAAGGAATATGAATTTTAATACTTTAAATAGTGAGGCATTTCATAGTGGGAACAGTGAGTCAAGGGACTTGCCCACAGTTGAATTGTCAACGCTTCCATTGATTCTTAAGATGGTGGTTGAGAGTGGCAATACAGATCAGTCACGGCTTGCGGAACTAATTTTAAGTGATCAAGATTTTTTTAGGAAACTTATAGAAGTATTCAGAGTTTGTGAAGACTTGGAAAATATGGATGGCCTTCACATGATTTTCAAAATAATCAAAGGGATCATTTTGCTTAACAGTACACAAATTTTTGAGCGTTTATTTAGTGATGAGTTAATGATGGACATTATTGGTACCCTTGAGTATGATCCAAAGGTTCCCCATGTTCAACATCATCGTAAATTCTTAAAGGACCATGTTATTTTTAAAGAGGCCTTACCTATAAGAAACTCAATTGTATTATCTAAGATACATCAGACATATAGAGTCGGTTTTTTGAAGGATGTTGTTTTGGCTAGAGTTTTGGATGAGGCTACTGTTGCTAATCTTAACTCCATAGTACATGCAAACAATGCCATTGTTGTTTCTTTATTGAAGGATGACAGCACATTTATCCAGGAATTGTTTGCTAGGTTAAAATCACCCACTACCTCTCCTGAATCAAAGAAAAATATGGTCCATTTCTTACATGAGTTTATTAGTTGTAGCAAGAGCTTACAGATGGTGCGACAGCTTCGGCTCTTTCGAGATCTGATGAATGAGGGGATCTTTGACGTCATCTCTGATTTACTCTTGCAAAGTCAAGACAAGAAGCTTATGCTTACTGGGACAGATATCCTCATTCTCTTCTTGAATCAGGATCCTAATCTTCTGCGATCTTATGTTGTTCGAGAGGAGGGAATTACACTTCTTGGACTATTGGTTAAGGGCATGATAACAGATTTTGGGGATGACATGCATTGCCAATTTCTTGAGATTCTCCGCAGTCTATTAGACTCATGCTCATTGTCTGGTGCACAGAGGGATACTATTATCGATATTTTCTATGAGAAGCATCTGAGTCAACTGATTGATGTGATAACAGCGTCATGTCCTACGGAAAATGTTCATGTGAATAGCCAAATAAAGTGCCAGAGTGGGACAAAGCCAGAGATTCTATCAAACATATGTGAATTGCTATGCTTTTGTGTCCAACACCACCCATATAGGATAAAGTGTAACTTTCTTCTTAATAAAGTCACGGATAAAATTCTATTACTGACACGGAGAAGAGAGAAATACCTTGTTGTTGGCGCTGTGCGGTTTGTTCGGGCTATTCTCTCACGTCATGTATGTTTAAATGTTTGTGCAGATATTGTCTGTTTTGACTTTGGCCAGCTGTTCTCCGACCTTTCATTTCCAAGAGGGGAGGAAGTACATGTAACAGTTTGGAGTGTTGCCCTGCAGGATGAGCATCTTATAAATCATTTCGTTAGAAGTGATCTTCTGAAACCAATTGTAGATGCCTTTGTTGCTAATGGTAATCGCTACAATCTGCTCAATTCAGCTGTTCTTGAGCTTTTTGAGTATATTCGCAAGGAGAATATGAAATTATTGCTGAAGTATATAATTGATTCTTTCTGGGACCAGTTAGTGAAATTTGAGCACTTGGTTTCCATTCATTCATTGAAAATAAAATATGAGCAGTATTTGGATACTGATGGGATAAAAGGGACTTCTATTATGAATGACATTCGAAGACGACTTGATGAGCGTGCTCCGGAGAAAGAAGAGGAAGACTACTTTAACGAGGACAGTGATGAGGAGGATACGGCGTCTGCATCCAATTCACATAATCAGAAAGTGAAACAACGGCAACATGCCTTATCCAATGGAGATGCTGAAAGCTACTCAAAGTTAAGTCCAAGATCCGGTGGGTTGGTTGACTATGATTATGATGAGGATGATGAAGACTACCGCCCACCACCAAGGAATAATCCAGAAGCATCTGAAGAGTATGAAGGAACAATGGAGTCTCTCAGGCTGAAAAGAAAATTGACAAAGGTCGAGATTTTACAGATGCCAAAGTTGTCTAAAACTTCAAAATCTAAAGATCGTGTTTTTGCTGCCTTATGTTCAACTTTGAGCCAGGCTGTGCTACCTCGTAAGAAACCTTTAGTCAACTTTATTACTGTTCCTTGTATAGAGAACAATCAAGAAAAGAAGCAACATGTTTCTGGAAGCTGCTGTGAGAATAGTAGTGTATCGGCTGAGCTAAACCATTTAGAGAAAGAAACTGCTGTGTCTAGAAATTCTTCTGATAGGTTGTACGACACATCTGACAATGGACAGTTGGACGGTGAGGAACACACTATGGTTTCACCAAAATCCCCGCCAGAGATGGCTGTTACTGGATCTTAA 2964 0.3974 MRGPTLRFACNNVVRHELSCSFLCFATSALQPSSVPLLLCAVLTADLLVSFQISKAVLYPMTLFGSSLSFAFLLCGLSISLSFQLTLLWFYVAVTNSSRVKVYRLNGDGKWDDQGTGHVSVDYLERSEDLGLYVYDEEDNENILLHRISPDDIYRKQEDTIISWRDPEYATELALSFQVPGGCSYIWDHICNVQRNMNFNTLNSEAFHSGNSESRDLPTVELSTLPLILKMVVESGNTDQSRLAELILSDQDFFRKLIEVFRVCEDLENMDGLHMIFKIIKGIILLNSTQIFERLFSDELMMDIIGTLEYDPKVPHVQHHRKFLKDHVIFKEALPIRNSIVLSKIHQTYRVGFLKDVVLARVLDEATVANLNSIVHANNAIVVSLLKDDSTFIQELFARLKSPTTSPESKKNMVHFLHEFISCSKSLQMVRQLRLFRDLMNEGIFDVISDLLLQSQDKKLMLTGTDILILFLNQDPNLLRSYVVREEGITLLGLLVKGMITDFGDDMHCQFLEILRSLLDSCSLSGAQRDTIIDIFYEKHLSQLIDVITASCPTENVHVNSQIKCQSGTKPEILSNICELLCFCVQHHPYRIKCNFLLNKVTDKILLLTRRREKYLVVGAVRFVRAILSRHVCLNVCADIVCFDFGQLFSDLSFPRGEEVHVTVWSVALQDEHLINHFVRSDLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENMKLLLKYIIDSFWDQLVKFEHLVSIHSLKIKYEQYLDTDGIKGTSIMNDIRRRLDERAPEKEEEDYFNEDSDEEDTASASNSHNQKVKQRQHALSNGDAESYSKLSPRSGGLVDYDYDEDDEDYRPPPRNNPEASEEYEGTMESLRLKRKLTKVEILQMPKLSKTSKSKDRVFAALCSTLSQAVLPRKKPLVNFITVPCIENNQEKKQHVSGSCCENSSVSAELNHLEKETAVSRNSSDRLYDTSDNGQLDGEEHTMVSPKSPPEMAVTGS 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00118 987 PANTHER ATP SYNTHASE GAMMA-RELATED 99 631 - -
Vimu10g00118 987 SUPERFAMILY PH domain-like 97 194 - -
Vimu10g00118 987 Pfam Phosphatase 4 regulatory subunit 3 251 439 IPR006887 -
Vimu10g00118 987 MobiDBLite consensus disorder prediction 945 987 - -
Vimu10g00118 987 SUPERFAMILY ARM repeat 390 704 IPR016024 -
Vimu10g00118 987 Gene3D - 94 214 IPR011993 -
Vimu10g00118 987 MobiDBLite consensus disorder prediction 770 859 - -
Vimu10g00118 987 MobiDBLite consensus disorder prediction 794 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00118 Vimu-Chr10 656555 672261 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00118 K17491 - gmx:100802657 1355.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00118 10 656555 672261 Vimu10g00118 10 656555 672261 ECH
Vimu7g01729 7 15934955 15951953 Vimu10g00118 10 656555 672261 PCT