Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01620 ATGCTCACTATGAGATTTTTAACATTTTCCACCAATCATATTATCTTTTCCTCTATCTTCCCTCACTTCAACCACCGCAAATTAATGTACACCACGGAACTTTTCGGCGTCTTCGTCGTTCCCGGCGTCGATGCTTCGCCGGCACTGGCGTCCACCACCCTCATTAACAACAAGTACTTCAAGATTACAGCCTTCACCAAACCCACTTCCCATAACGGCGTGAATTTGAGGTCAGAAAAGGCTTTGAAGCCTTATCGCTGTAGCGCTGACGCAAACTCTGATTTTTTCTCTGTGACATCTTCGAACAAGTCCGACGTGGACTACCTTGGGCAGAGCACCAGAGGTGATTTGAATGTCAAGTCGGAGCATCTTGAAGCTTTCGGATTTGATGGTCATGCTGCTTTAGAAGGTCCAATTGAGGAAGTGGCCAGATCAGAAGCAAGACAAGCAGAGGATTTGCTAAAAGATTTGGGCATTCCGAGCCCTTCTTCATCCAGAAATTCTCCTCGTGGAATATTCTGCAGCCGAACATTGAATCTGCGGTCCATCAGTGCCATTGGATATGACATGGACTATACCTTGATTCATTATAACGTGATGGCTTGGGAAGGCAGGGCTTATGACTACTGTATGGAAAACCTTAGGAACATGGGTTTCCCTGTTGATGGACTTGCCTTTGATCCTAATCTGGTAATTAGAGGCCTTGTCATAGACAAAGAGAATGGAAATTTGGTTAAAGCTGATCGATTTGGTTACATAAAAAGAGCCATGCATGGCACCAAAATGTTATCTACTCGAGCTGTGAGTGAGATGTATGGGAGAGAACTGGTGGACCTGCGAAAGGAGAGTCGATGGGAGTTTCTCAATACACTGTTTTCTGTGTCTGAAGCTGTGGCCTACATGCAGATGGTTGACAGATTGGATGATGGGACTATACCAGCAGATCTTGGCCCTCTCGATTATAAAGGACTATATAAGGCTGTTGGAAAAGCTCTTTTCTGGGCACATGTAGAAGGTCGCCTTAAGAGCGAGATCATGTCTAAGCCTGAACTTTTTGTGGAGCCTGATCCAGAATTACCTTTGGCGCTTCTGGATCAGAAGGAGGCTGGTAAAAAACTTCTGCTAATTACCAACTCCGATTATCATTACACTGACAAAATGATGCGGCACTCTTTTAATAGATTCCTTCCCAATGATATGAGTTGGCGAGATCTATTTGACATTGTAATTGTCTCAGCAAGAAAACCAGAGTTCTTCCAAACATCACACCCCATGTATGAAGTGGTCACAGACGAGGGTCTTATGCGTCCATGCTTCAAGGCTCAGACTGGTGGTTTGTATTCAGGGGGAAGTGCACAAATGGTTGAAAATTCTCTAAATATTCATGGAGATGAGATATTGTATGTTGGCGACCATATTTACACTGATGTCAGTCAATCCAAAGTCCATTTGCGATGGCGAACAGCATTGATTTGTCGAGAACTGGAAGAAGAGTACAATGCCTTGATTGGTAACCGGAGTTATAGAGAATCATTGGTGGAGCTTATAAATCAAAAGGAGGTAGTGGGGGATCTCTTTAACCAACTTCGGCTAGCTCTGCAGAGGCGAAGCAAAGACCGTCCTGCTCAGACCCTAGCAGCAACTAACATGAATGATGAAGACCTCACGGATAGCATGCAAAAGCTACTTATTGTTATGCAAAGACTGGATAATAAAATTGCTCCAATGCTGGAGGCTGACGGGGAGCTCTTCAATTCAAGGTGGGGTTTTCTATCTCGTGCTGGACTGTGGGATAAAAGCCACTTGATGAGACAAATTGAGAAATATGCCGACATTTATACATCTAGGGTGTCAAACTTTTTGGATTATACGCCCTTCATGTATTTCCGCTCTCAGGAACAGAACCTTGCGCATGACTCGTACACGCACTATTGTTCACAAATTAATAATGAGCATTCTTCCTAG 1965 0.4402 MLTMRFLTFSTNHIIFSSIFPHFNHRKLMYTTELFGVFVVPGVDASPALASTTLINNKYFKITAFTKPTSHNGVNLRSEKALKPYRCSADANSDFFSVTSSNKSDVDYLGQSTRGDLNVKSEHLEAFGFDGHAALEGPIEEVARSEARQAEDLLKDLGIPSPSSSRNSPRGIFCSRTLNLRSISAIGYDMDYTLIHYNVMAWEGRAYDYCMENLRNMGFPVDGLAFDPNLVIRGLVIDKENGNLVKADRFGYIKRAMHGTKMLSTRAVSEMYGRELVDLRKESRWEFLNTLFSVSEAVAYMQMVDRLDDGTIPADLGPLDYKGLYKAVGKALFWAHVEGRLKSEIMSKPELFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMRHSFNRFLPNDMSWRDLFDIVIVSARKPEFFQTSHPMYEVVTDEGLMRPCFKAQTGGLYSGGSAQMVENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICRELEEEYNALIGNRSYRESLVELINQKEVVGDLFNQLRLALQRRSKDRPAQTLAATNMNDEDLTDSMQKLLIVMQRLDNKIAPMLEADGELFNSRWGFLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLDYTPFMYFRSQEQNLAHDSYTHYCSQINNEHSS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01620 654 NCBIfam HAD-IG family 5'-nucleotidase 172 512 IPR008380 -
Vimu7g01620 654 Pfam 5' nucleotidase family 172 640 IPR008380 -
Vimu7g01620 654 CDD HAD_cN-II 173 495 - -
Vimu7g01620 654 SUPERFAMILY HAD-like 169 641 IPR036412 -
Vimu7g01620 654 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 163 639 IPR008380 -
Vimu7g01620 654 FunFam Haloacid dehalogenase hydrolase 331 522 - -
Vimu7g01620 654 Gene3D - 335 523 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01620 Vimu-Chr7 15153831 15162419 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01620 - - vun:114174902 1223.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01620 7 15153831 15162419 Vimu7g01620 7 15153831 15162419 ECH
Vimu7g01620 7 15153831 15162419 Vimu10g00545 10 4460519 4474075 PCT