Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00545 ATGGTTGACATGTTGGATGATGGGGTTATACCAGCCAATCTTGGACCCTTTGATTATAAAGGGCTTTATAAGGCTATGGGAATGGCCCTTCTCACGGCACATCTAGAAGGTCACCTCAAGAATGAGATTATGTCCAACCCTGAACAATTTGTGGAGCTTGATCCGGAATTGCCCTTCACACTTTTGGATCAAAAGGAGGCCGGAAAAAAGCTTGTGCTCATTACCAATTCAGATTATCATTATACAGACAAAATGATGCATTATTCCTTTAATAGATTCCTTCCTAGTGACATGGGTTGGCGAGATTTATTTGACATTATTGTTGTCTCGGCAAACAAACCAGAATTCTTTCAAATGTCACACCCCATGTATGAGCTGGTGACAGATGAGGGTTTGATGCGTCCATGCTTTAAGGCTCAAATTGGTAGTCTGCTCACCACCATTGCCACCACAGACATGGTGGTTGGAAACTCCCAAGTCCGTTCCAAAGATGGTGACATCCCATTTGGCTCTGATTTGAGAGGGAGTGCAAAGATGGTTGAAAGTTCCCTGAATATACATGGAAATGACATACTTTACATTGGAGACCACATTTACACTGATGTTAACCAATCCAAAGTCCATTTGCAATGGCGAACAGCATTGATTTGTCGAGAATTGGAAGAAGAATATCATGCCTTAATTCATAGCCGAGGTTATAGACAATCACTGTTGGAGCTTATAAATCAAAAGGAAGTTGTTGGTGATATCTTTAACCGACTACAACTTACTCTCCAGAGGCGAAGTAAAAGACTTAATGCTCAAACCGTTGCTGCAACTGACATGGACAATGAAAACCTTAGTCAAAGCATGCAGAAATTACTTGTCGTCATGCAAATACTAGATGGAAAAATTGCTCCAATGCTAGAGGCAGATGGGGCTCTCTTCAATAAAAGTCTATGGCACTCCCATCATCACCATTTGAACTATTTTTTGTTCTTGGTCTGCTTTGGTGGAACTTGGTTCCTTGGTCAAGGGTATTGTTGGAAGCTCGTTCAATGCCTGCCTGAATTCTTAGGATATAAATGA 1068 0.4129 MVDMLDDGVIPANLGPFDYKGLYKAMGMALLTAHLEGHLKNEIMSNPEQFVELDPELPFTLLDQKEAGKKLVLITNSDYHYTDKMMHYSFNRFLPSDMGWRDLFDIIVVSANKPEFFQMSHPMYELVTDEGLMRPCFKAQIGSLLTTIATTDMVVGNSQVRSKDGDIPFGSDLRGSAKMVESSLNIHGNDILYIGDHIYTDVNQSKVHLQWRTALICRELEEEYHALIHSRGYRQSLLELINQKEVVGDIFNRLQLTLQRRSKRLNAQTVAATDMDNENLSQSMQKLLVVMQILDGKIAPMLEADGALFNKSLWHSHHHHLNYFLFLVCFGGTWFLGQGYCWKLVQCLPEFLGYK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00545 355 Gene3D - 30 247 IPR023214 -
Vimu10g00545 355 Pfam 5' nucleotidase family 15 289 IPR008380 -
Vimu10g00545 355 SUPERFAMILY HAD-like 2 298 IPR036412 -
Vimu10g00545 355 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 1 313 IPR008380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00545 Vimu-Chr10 4460519 4474075 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00545 - - gmx:100779458 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01620 7 15153831 15162419 Vimu10g00545 10 4460519 4474075 PCT