Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01612 ATGAAGCAAAAGACGCCATCTTCCCCAATCATTGCAAGAACTGCGTTGAAGAAGCACGGTGACAACAACAAGTCCCTGCAGAGTCCACCGCAGCCGCGCCTCAGAGCTTCTTCCAAGACTCCAAAGTCACCACCAGAGTCATCAACCAGAGCCAAGTCAGTGCCCCTGGACTTGAAGGACGTTTCAAGGGCCAAGAGGGGTGCTGCTGTGGGGTCTCGAAAGGGTAGGGAAGCTGAGGAGGCTGAGGTTGTTGTTGTTGCTCGGCCACGGCGAAGGCTTGGGGATTTCGGTTTGAGGAAGGGTGGAGATGATGACCCTGATGGGAAGAAGAGGAAGGAGTTACAGGAGAAGCTCGAAGTGAGTGAAAATTTGATCAAGAGTTTGCAATCTGAGGTGCTGGCGTTGAAGGAGGAATTGGAAAGAGTTAAGAGCTTGAATGTGGACCTTGAGTCCCAGAACACAAAGCTCACTCGGAACCTTGCTGCTGCTGAAGCTAAGCAAGCAACTGTTGGGATTGGCAACAGTGGAAAGAAGGAGTCACTAATAGGAGAACACCAGAGTCCCAAGTTTAAAGACATACAGAAACTCATTGCTGACAAATTGGAACTGTCTAGAGTGAAAAAGGAAGGTAATCCTGAAGTTAATTTTGCCAAAGCATCAATTCCTTCACCAACCAGAAGTTTTTCCATTCATGAATCTAAAAGTATAGGAAGAAAATCTCCACCCAATATATGCCTGCAGCCACCTCCACCACTACCACCACCAATTATAGGAAGAAATTCTGCACACAGCACATGTCTGCAACCCCCTCCGCCTCCTCCACCACCTCCAATTCCATCTCGGCCTTCAGCAAGATTATCTGACACCAAAAAGGGCGCTGCAATTGTTGAACTATTTCACTCGTTAAAGGGTAAAGATGGGAAGATAGACTCAAAAGGACCTGTGAATCATCAGAGACCAGTAGTTATTAGTGCACACAGTAGCATTGTGGGAGAAATTCAAAACCGTTCAGCTCATCTGTTAGCCATAAGGACAGATATTGAAACAAAAGGAGAGTTCGTTAATGACCTCATAAAGAAAGTAGTAGATGCAGCATTCACGGATATTGAAGAGGTCTTAAAGTTTGTTAATTGGCTTGATGGAAAACTATCATCATTGGCTGATGAACGTGCTGTCTTGAAGCACTTTAAGTGGCCTGAGAAGAGAGCTGATGCATTTAGAGAGGCTGCAATTGAGTATCATGAACTCAAAATGCTAGAACAGGAAATTTCCTCCTACAAGGATGACCCTGATATTCCATGTGGAGCTGCCTTAAAAAAGATGGCCAGCCTATTAGACAAGTCTGAGAGGAGAATACAGAGGCTAATCAAGCTACGAAGTTCAGTCATACATTCATATCAAGTGTACAACATTCCAACTGCATGGATGCTTGATTCTGGAATAATGAGCAATATAAAGCAGGCTTCCATGACCCTGGTCAAGATGTACATGAAAAGAGTGACAATCGAGCTTGAATCCATTCGCAATTCCGACAGAGAATCTATTCAAGATTCTCTTCTGCTTCAGGGTGTGCATTTTGCATACAGAGCCCATCAGTTTGCTGGAGGATTGGACTCAGAAACAATGTGTTGTTTTGAAGAGATAAGGCAACGTGTACCAGGACATCTAGCAGGGTCTCAAGAACTTTTGGCTGGCATACCATAA 1704 0.4495 MKQKTPSSPIIARTALKKHGDNNKSLQSPPQPRLRASSKTPKSPPESSTRAKSVPLDLKDVSRAKRGAAVGSRKGREAEEAEVVVVARPRRRLGDFGLRKGGDDDPDGKKRKELQEKLEVSENLIKSLQSEVLALKEELERVKSLNVDLESQNTKLTRNLAAAEAKQATVGIGNSGKKESLIGEHQSPKFKDIQKLIADKLELSRVKKEGNPEVNFAKASIPSPTRSFSIHESKSIGRKSPPNICLQPPPPLPPPIIGRNSAHSTCLQPPPPPPPPPIPSRPSARLSDTKKGAAIVELFHSLKGKDGKIDSKGPVNHQRPVVISAHSSIVGEIQNRSAHLLAIRTDIETKGEFVNDLIKKVVDAAFTDIEEVLKFVNWLDGKLSSLADERAVLKHFKWPEKRADAFREAAIEYHELKMLEQEISSYKDDPDIPCGAALKKMASLLDKSERRIQRLIKLRSSVIHSYQVYNIPTAWMLDSGIMSNIKQASMTLVKMYMKRVTIELESIRNSDRESIQDSLLLQGVHFAYRAHQFAGGLDSETMCCFEEIRQRVPGHLAGSQELLAGIP 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01612 567 MobiDBLite consensus disorder prediction 266 282 - -
Vimu7g01612 567 MobiDBLite consensus disorder prediction 1 84 - -
Vimu7g01612 567 MobiDBLite consensus disorder prediction 56 84 - -
Vimu7g01612 567 Coils Coil 438 458 - -
Vimu7g01612 567 MobiDBLite consensus disorder prediction 216 287 - -
Vimu7g01612 567 MobiDBLite consensus disorder prediction 218 236 - -
Vimu7g01612 567 MobiDBLite consensus disorder prediction 21 50 - -
Vimu7g01612 567 Coils Coil 111 166 - -
Vimu7g01612 567 MobiDBLite consensus disorder prediction 243 257 - -
Vimu7g01612 567 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 19 554 IPR040265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01612 Vimu-Chr7 15084827 15088494 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01612 - - gmx:100820135 825.469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01612 7 15084827 15088494 Vimu7g01612 7 15084827 15088494 ECH
Vimu7g01612 7 15084827 15088494 Vimu10g00544 10 4442429 4446555 PCT