Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01594 ATGGAGGAAATTAACGGTGTGTACCCTGTTTCTTATCTGTTGGAAGCTAAGGATGGGACTGTCCCAGTAGCTTCTGCATTTGTTGGTCACCAAGAAGTTGTGCAGGATACAGACCACAAATTTGTAACGAAAGCTGTCGAAGAAGCATATAACGGGGTAGATTGTAAAGATGGAGGCCCATTTGGTGCTGTTATAGTTCGTAAGGGTGAAATAATTGCTAGTAGCCACAACATGGTTCTGAGAAACACAGACCCAACTGCTCATGCCGAGGTGACAGCAATAAGAGAGGCATGTAAGAAGCTTAACCAAATAGAACTTTCAGACTGTGAAATATTTACTTCCTGTGAGCCTTGCCCCATGTGCTTCGGTGCAATCCACCTCGCTCGCATTAAGAGATTAGTTTATGGTGCAAAGGCTGAGGCAGCAATTGCTATTGGGTTTGATGATTTTATTGCAGATGCACTGCGAGGTACTGGATTCTATCAGAAAGCAACACTGGAAATCAAAAGAGCTGATGGTAATGAGGCCGTGATTGCTGAAGAGGTCTTTGAGAAAACAAAGACAAAATTCCAAATGTATTAG 582 0.4296 MEEINGVYPVSYLLEAKDGTVPVASAFVGHQEVVQDTDHKFVTKAVEEAYNGVDCKDGGPFGAVIVRKGEIIASSHNMVLRNTDPTAHAEVTAIREACKKLNQIELSDCEIFTSCEPCPMCFGAIHLARIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKATLEIKRADGNEAVIAEEVFEKTKTKFQMY 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01594 193 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 36 150 IPR002125 -
Vimu7g01594 193 SUPERFAMILY Cytidine deaminase-like 30 151 IPR016193 GO:0003824
Vimu7g01594 193 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 37 136 IPR002125 -
Vimu7g01594 193 Gene3D Cytidine Deaminase, domain 2 17 192 - -
Vimu7g01594 193 CDD nucleoside_deaminase 45 149 - -
Vimu7g01594 193 FunFam tRNA-specific adenosine deaminase 36 192 - -
Vimu7g01594 193 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 31 140 - -
Vimu7g01594 193 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 88 125 IPR016192 GO:0008270|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01594 Vimu-Chr7 14967577 14970235 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01594 - - gmx:100820230 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01594 7 14967577 14970235 Vimu10g00541 10 4413751 4414692 PCT