Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01566 ATGTTTAGATTAAGGAACTGTGAAGGCCCTGTGCGGTTCTTGTATCAGCAAGCTCGGCATCACCCTCACCGTAACAATCTCATGGCTTATTTAGTAGGTTTCGATCCTTGCTCCCACTTGAGCAGGGCCTTTTCGCAGTACCCTTCTCCCTCTTCTTCTGATCGTGGCTGCTATCTGTCTTTCCCACTTCTCCATAAACTTGTTTATGCAAATGTTTTTGGGGTTAGAAGAAGCATTGATTTTGGTCGTAGAGGTTGTGGCTTTGATAGTAGTGGTAGTTGTAGTGGTAATGGTGATAGGATCTTTGTGAGGGCTAAGGCAAGGTCCCGTGGCTTTGCATCGAATCGTCGCCAGCCGATGTTGGCTGATTTGGAGAAAAGGAATTCTGTTAAGAGTGATGAATCTGATGCTACTTTGGTTAAGATTGATGACGGATCTATAAATGGAAGTCCTGCTAAACCTCCTTGTTTCAATGATCACCGATTGTCCCAGAAACTTGTTGTTGCCGTTGATGTTGATGAGGTATTAGGAAACTTCGTGTCAGCTCTCAACAAGTTCATTGCAGATCGATATTCAGCAAATTATTCAGTTTCTGAATATCACGTGTACGAGTTTTGTAAGATATGGAATTGTTCACGTGATGAAGCTGACATCCGTGTACATGAATTTTTTAAGACACCATATTTCAAGTCAGGGATCCACCCTCTTCCAGGTGCTCATACGGCTCTTCAGAAGTTATCAAGATTTTGTAGCCTATCAGTTGTAACTTCACGGCAGAATGCAATTAAGGATCACACAATCGAGTGGATAGAGAAGAATTTTCCTGGACTGTTCCATGAGATTCACTTTGGTAACCACTTTGCTCTTGATGGTGTGTCAAGACCAAAGTCAGAAATTTGTAGGTCCTTAAATGCCAAGGTTCTTATCGATGATAACCCTCGATATGCCATAGAGTGTGCTAATGTTGGAATTAGAGTCCTGCTTTTTGATTATGAAAATTCATATCCTTGGTGCAAGAGCGAGTCTACGGAAGAACACCCTTTGGTGACCAAAGTAAAGAATTGGGATGAAGTCGAACAACAATTAATGTCATTGATTGCCTCTTAG 1107 0.4192 MFRLRNCEGPVRFLYQQARHHPHRNNLMAYLVGFDPCSHLSRAFSQYPSPSSSDRGCYLSFPLLHKLVYANVFGVRRSIDFGRRGCGFDSSGSCSGNGDRIFVRAKARSRGFASNRRQPMLADLEKRNSVKSDESDATLVKIDDGSINGSPAKPPCFNDHRLSQKLVVAVDVDEVLGNFVSALNKFIADRYSANYSVSEYHVYEFCKIWNCSRDEADIRVHEFFKTPYFKSGIHPLPGAHTALQKLSRFCSLSVVTSRQNAIKDHTIEWIEKNFPGLFHEIHFGNHFALDGVSRPKSEICRSLNAKVLIDDNPRYAIECANVGIRVLLFDYENSYPWCKSESTEEHPLVTKVKNWDEVEQQLMSLIAS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01566 368 Gene3D - 215 365 IPR023214 -
Vimu7g01566 368 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 166 362 IPR010708 GO:0008253|GO:0009264
Vimu7g01566 368 SUPERFAMILY HAD-like 159 363 IPR036412 -
Vimu7g01566 368 PANTHER NUCLEOTIDASE YQFW-RELATED 74 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01566 Vimu-Chr7 14767006 14770032 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01566 - - gmx:100793947 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01566 7 14767006 14770032 Vimu7g01566 7 14767006 14770032 ECH
Vimu7g01566 7 14767006 14770032 Vimu10g00534 10 4291708 4295003 PCT