Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00534 ATGGCTCGTATGTTAGGCTATGAACCTTGTTCCCATTCAAGTAGGGTCTTTTTCAATTACTCTTCTATTTCTTCCCCTGGGGCTAACAGAAGACTTGGATTCACTTTTAGAGCTTGTTCTGATGCCAATGCTGGTGATAATTCTAAGAGGGTTTTCGTGAAGGAAAAGAAAAAGCTTTATGGTTTTGCATGTCTTCCTCACCCACCCTTGTTAGGTAATTTTGAGGAAGGTATTTCTGTTGAAGATAGATCTTTGGGTGGAAGTCCCTCCAAACCTTTTTGTTTCCCTGATCAACCCTTACTCCAGAAACTTGTTGTTGCTGTTGATGTTGATGAAGCTCTGAACGAGTTCATAGCAGATCGATACTCATCAAGTCATTCAGTTTCTGAGTATCATGTGTACGAGTTCTTCAAGGACTTGAGTCTCACATTAGAAGTATGGAATTCTAGTGTGGGATTTATAAGGCATTGGGCTTTCCAACTGCAATGGTTGGTTTTTGTCATGGTGTGGGAATTTTCAGTGTGTTGCATGTTCTTATCTGTTCTTCATTATGCCTTCACAGTACTAGTGGACAATTCTCCTCTCCTCAACGATAGTGTTTTGCATGCTAACAGACATCCTAGTTTCTTTTTGAAGTACATACCTTCATGTTGTGCAGCGAATACTCGTGTTCATGAATTTTTTGAGACATCATATTTCAAGTCAGGGATCCAACCTATTCCAGGTGCTCAGGCATTTGTGTATTTTATGATCAGATCTCGGCAAAATGTGATCAAGGATCACACAGTTGAGTGGATAGAGAAGCATTTTTCAGGACTGTTTCAAGATATTCACTTTGGAAACCACTTTGCTCTTGATGGGGTGTCCAGACCAAAGTCAGATATTTGTAGGTCTTTAAATGCAAATATTCTCATTGATGATAATCCAAGATATGCCATAGAGTGTGCTGAAGCCGGAATTAGAGTCCTACTCTTTGATTATGAAAACTCATACCCTTGGTCCAAGACTGATTCTGCTGATCAGCATCCCCTGGTGACCAAAGTTAAGAACTGGGAAGAAGTTGAACAACAATTAATGTCATTGATAGCTTTATAG 1095 0.3973 MARMLGYEPCSHSSRVFFNYSSISSPGANRRLGFTFRACSDANAGDNSKRVFVKEKKKLYGFACLPHPPLLGNFEEGISVEDRSLGGSPSKPFCFPDQPLLQKLVVAVDVDEALNEFIADRYSSSHSVSEYHVYEFFKDLSLTLEVWNSSVGFIRHWAFQLQWLVFVMVWEFSVCCMFLSVLHYAFTVLVDNSPLLNDSVLHANRHPSFFLKYIPSCCAANTRVHEFFETSYFKSGIQPIPGAQAFVYFMIRSRQNVIKDHTVEWIEKHFSGLFQDIHFGNHFALDGVSRPKSDICRSLNANILIDDNPRYAIECAEAGIRVLLFDYENSYPWSKTDSADQHPLVTKVKNWEEVEQQLMSLIAL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00534 364 Gene3D - 220 361 IPR023214 -
Vimu10g00534 364 PANTHER NUCLEOTIDASE YQFW-RELATED 31 148 - -
Vimu10g00534 364 SUPERFAMILY HAD-like 93 359 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00534 Vimu-Chr10 4291708 4295003 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00534 - - gmx:100810501 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00534 10 4291708 4295003 Vimu10g00534 10 4291708 4295003 ECH
Vimu7g01566 7 14767006 14770032 Vimu10g00534 10 4291708 4295003 PCT