Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01529 ATGTTGGGGAAGAGGCCCCGACCCATGATCGGAAAGTTGTCGGAGTTGTTGGTCTCAAGGGGTCGTGCAGTCACGCTTCCGGACGCCGCCACCGCCGTAAGCCCAAGAACTCCATCAGGCACCGTGATGCAGTCTCCAAGAGGCTTCAAGAACTACCACCTCGGTGGCGTTGGTCTTGGAATTGTGGTGGCTCTTGATAAACCATCCAACGAGGTTTTGCCCAAACACGCAGTTTGCACCTCCAATTTGAAAATCCAAGAGGAGTTTGATGTGGAGGAATACACCTATGTCACACGCCATGTACCTAACCAAACATTCACCAAGGTATACTACGATGGGGGTCAAGGCGAAATTCAGAGACATGACTATTCTAACAATAGCAATAACAACATCAACAACAAGAACAGCCTTGGTGTGTTCAGAAGAGCCGCACCACAGCCTTTATTCGAGTCTGAATCATCGTATCCCACATCGAATTTTCTCAGTTCGTGCAACCTCTGCGGAAAGAAACTCCACGGCAAGGACATATACATGTACAGAGGAGAGAAAGGGTTTTGTAGTCCAGAGTGTCGTTCGAGTCAAATAATGATGGATGAACGCAAAGAGAGGTGTAGATCGGAAGCATCATCGAGGTCTGTTGAAATGTCAAATATTTTCAACTGGGATTCTTGCACTTTAAGGTTTGGTGGTGACAAACAAGAAGAAATCGATGATGCTGCCACTCTATGA 729 0.4719 MLGKRPRPMIGKLSELLVSRGRAVTLPDAATAVSPRTPSGTVMQSPRGFKNYHLGGVGLGIVVALDKPSNEVLPKHAVCTSNLKIQEEFDVEEYTYVTRHVPNQTFTKVYYDGGQGEIQRHDYSNNSNNNINNKNSLGVFRRAAPQPLFESESSYPTSNFLSSCNLCGKKLHGKDIYMYRGEKGFCSPECRSSQIMMDERKERCRSEASSRSVEMSNIFNWDSCTLRFGGDKQEEIDDAATL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01529 242 ProSiteProfiles Zinc finger FLZ-type profile. 159 202 IPR007650 -
Vimu7g01529 242 PANTHER OS02G0174800 PROTEIN 1 216 IPR044604 -
Vimu7g01529 242 Pfam zinc-finger of the FCS-type, C2-C2 151 201 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01529 Vimu-Chr7 14408434 14409271 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01529 - - vun:114178972 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01529 7 14408434 14409271 Vimu7g01529 7 14408434 14409271 ECH
Vimu7g01529 7 14408434 14409271 Vimu10g00489 10 3763108 3763975 PCT