Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00489 ATGTTGGGCAAAAGGCCACAACCACTGATCGGAAAAATCTCCGAACTTTTGGTGTCCGGTGGCCGCGCTGCCGCTCTTTTCGACGCCATCGGAAGCCCGAGAAGCCCATTTGAATATATGAACTTAAAGATGCAACAATCACCCAAGGGTCTAAAAAGTTACGACCTTGGTGGTGTTGGTCTGGGAATTGTGGTGGCTCTAGATAAATCGGAGGAACCAGGGCACGAAATTCTGCCCAAACACGCCGTTTGCACATCAAGTTTGAACAAATCGGTTAAACAAAGCGCGTTTCAAAAGGGTGTGACCGAAATTCCCGTCGGAAGCTCCGAGGACTACACATATGTCACATACCATATTTCCAACAAGACGATCACTAAGGTTTATTACGATGGCGGTGAAGGTGGAATCCTAACACATGGCTACTATAACATTAACAACAACACCAACAACAACGTCGGTGGTGTTAGAAGATTCCCACAAACGCATAATTTAATTCAAGATGATGACGAACCGTCATATGCAACATCAGATTTTCTCAGCACATGTCACTTGTGCAGAAAGAATCTCCATGGCCAAGACATATACATGTACAGAGGGGAGAAGGCTTTTTGCAGCACAGATTGCCGTTCAAGGCAAATATCCATGGACGAACGCAAAGAGAGGTGCAGATCAGAAGCTTCAAGATCTGTGGAATTGTCTAGTTCATCACACACAAGAGAACAAATGTTTTCAACTGGGATTGTGGCCCTTTAG 753 0.4515 MLGKRPQPLIGKISELLVSGGRAAALFDAIGSPRSPFEYMNLKMQQSPKGLKSYDLGGVGLGIVVALDKSEEPGHEILPKHAVCTSSLNKSVKQSAFQKGVTEIPVGSSEDYTYVTYHISNKTITKVYYDGGEGGILTHGYYNINNNTNNNVGGVRRFPQTHNLIQDDDEPSYATSDFLSTCHLCRKNLHGQDIYMYRGEKAFCSTDCRSRQISMDERKERCRSEASRSVELSSSSHTREQMFSTGIVAL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00489 250 ProSiteProfiles Zinc finger FLZ-type profile. 177 220 IPR007650 -
Vimu10g00489 250 PANTHER OS02G0174800 PROTEIN 1 249 IPR044604 -
Vimu10g00489 250 Pfam zinc-finger of the FCS-type, C2-C2 168 219 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00489 Vimu-Chr10 3763108 3763975 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00489 - - gmx:100813156 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00489 10 3763108 3763975 Vimu10g00489 10 3763108 3763975 ECH
Vimu7g01529 7 14408434 14409271 Vimu10g00489 10 3763108 3763975 PCT