Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01513 ATGACTGCGAACACAAACACGATGCCGATCGTTGGCAAACTGTACTGTTCATCGTCTCAGACGGTGCATGTGGTGAGGAAGAGGCCACACGTGGTGAATGGTGGTGGTTTTGTGGTGATGGATTCTAGTGCCCAGAGGGTTATGTTCAGGGTCGATGGTTGTGGTGTTCGTGGCAAAAAGGGAGACTTGATCCTAAGAGAAGGAGATGGAGAAGCTTTGCTTCTCATGCTTCGGAAGGGAGGCATAGTTGAGGCCTTGAGCATTTACAAGAAGTGGAAAGGTTACAGTTTAGACTACGAAGGATCACGGAAGCTGGTTTTCAGCTTGAGAGAACCGAATTCTTGTTTGTTTAAGAACAAGGCAATCAGAATCTCCACCAGGAACAGAGGCTGTGATTTTAAGATCAGTGGGTATTTCCCGGACAAGTGTTGTAGCATTGTTGACTCAAAAGGCAACGAGGTAGCACAGGTGAGGGTGATGAAGGAAGTGGAGGAGTTGGTGGAAAACAAGGATTTGTATCATGTGGTGGTGAAACCTGGGATGGATCAAGCTTTTGTTTTTGGAGTCATAGCTATTCTTGATCACATTTATGGAGAATCTACCCACTGCTAA 612 0.4608 MTANTNTMPIVGKLYCSSSQTVHVVRKRPHVVNGGGFVVMDSSAQRVMFRVDGCGVRGKKGDLILREGDGEALLLMLRKGGIVEALSIYKKWKGYSLDYEGSRKLVFSLREPNSCLFKNKAIRISTRNRGCDFKISGYFPDKCCSIVDSKGNEVAQVRVMKEVEELVENKDLYHVVVKPGMDQAFVFGVIAILDHIYGESTHC 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01513 203 Gene3D - 8 201 IPR038595 -
Vimu7g01513 203 SUPERFAMILY Tubby C-terminal domain-like 8 197 IPR025659 -
Vimu7g01513 203 PANTHER - 22 198 IPR007612 -
Vimu7g01513 203 Pfam LURP-one-related 10 192 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01513 Vimu-Chr7 14320359 14321139 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01513 - - gmx:100306504 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01513 7 14320359 14321139 Vimu7g01513 7 14320359 14321139 ECH
Vimu7g01513 7 14320359 14321139 Vimu10g00471 10 3599284 3600417 PCT