Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00471 ATGATGCCTGTTATTAGCAAAATGTACTGTTCATCTTCTCAGATGGTGCTTGGGGTCAGAAGAAGGCCACATGTGGTGAATGGAGGGGGATTGGTAGTCACGGATTGTAGTGCCCAAAGGGTTGTTTTCAAGGTTGATGGCTGTGGAATTCATGGCACAAAGGAACAGTTGATTCTAAGAGATGCTGAAGGAGATGCTTTACTTCTCATGCGTCGAAAGGGAGGCATGGTTGAGGCCCTTAGCATTTACAAGAAGTGGAAAGGATATAGCATGAACTATGAAGGATCACAGACCCTGGTTTTCAGCTTGAAAGAACCGAATTCTTGTTTTGTCAGGAACAATGGGATTAGAATCTCCATTGAGCCCAGAGCTGCAAGTAACAAAGGCTGGGACTTTGAGATCAGGGGTTACTTCCCTGATAGGAATTGTAGCATTGTTGACATTAGGGGCAATGTTATTGCCCAGGTTGGGGTGAATAAAGAAGTGGAGAAATTGATGGAAACCAAGGATCTGTACAATGTGGTGGTGAAACCTGGGATGGATCAAGCCTTTGTTTTTGGAGTCATCGCAGTTCTTGACTACATTTATGGAGAATCCACCTACTGCTAA 609 0.4417 MMPVISKMYCSSSQMVLGVRRRPHVVNGGGLVVTDCSAQRVVFKVDGCGIHGTKEQLILRDAEGDALLLMRRKGGMVEALSIYKKWKGYSMNYEGSQTLVFSLKEPNSCFVRNNGIRISIEPRAASNKGWDFEIRGYFPDRNCSIVDIRGNVIAQVGVNKEVEKLMETKDLYNVVVKPGMDQAFVFGVIAVLDYIYGESTYC 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00471 202 SUPERFAMILY Tubby C-terminal domain-like 2 196 IPR025659 -
Vimu10g00471 202 Gene3D - 3 200 IPR038595 -
Vimu10g00471 202 Pfam LURP-one-related 4 191 IPR007612 -
Vimu10g00471 202 PANTHER - 16 197 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00471 Vimu-Chr10 3599284 3600417 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00471 - - gmx:100817988 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00471 10 3599284 3600417 Vimu10g00471 10 3599284 3600417 ECH
Vimu7g01513 7 14320359 14321139 Vimu10g00471 10 3599284 3600417 PCT