Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01499 ATGACGACAGGAAAGTGTGAATTATGCACAAAAGATGAAGAAGCGAAGAAAAGAAGAGGTGAAGTGTGGCGGGAAAGAAAGGAAGAAAGCAGAGAGAGAGAGAGAGAGAGAGAGAGCATGGTGAAGTACGATAGGAGGGAATGCACAATGCTACCGTTCAACCAAGCTACCCTAACTCCTAAACCCCTCAATCACACTCCTTCACCCAACCACCACCAATCACCACCACCACCACCACCACCACCTTCCTCTTCTTCTTCCACTGCTCCAACCATGACCAACACCAATTCAATTATAGATTCTAATCCTCCAAACCTCGAAGGAGATTCCGATTCTGATATCGACGCTCTCATCAATGCTTTTTTCGAACCTAATCCCCAATTCCCCTCTCTCGATCACCTCCAAGGATCCACCTCCGATGCCAAGGAATCATCTCTCAAGAGAGGATTAGACACCGGGGATGATTCTTCCCACGCACCAATTCCCCTCAAACGCGGTCGTATTGACAATGTCATCTTCCCTCTCGCTGATCTCCACGCCACCTTTCAAATTCAAAACCCTACTCCTTCTCCTTTTCCTCTCTCTCAGCCTCTGCCGCATGCCGCCGCTACCAATGGAGACACTCAAGTTGTGGAAGGGCAGGGGAGGCGCCCGGTGTTTGACTCCGATTTTCTCTCCAGGGCTCTCCGTGAAGCTGAATCGGTCTTTCCGCAGAATTCAGGCGACAACGACGTTAACTTTGACGTGGAACCTGGAGATTTTAGTGCACCTTATCTATCGCTGAATGATTTTAGGAGGATTCGGAACATGGAGCGTTTCCGACAGATAGCGAAGGAAAGCGCCACTCACTATGCTCGATTCACGTCGGAGGAGACCGCAGATGAAAGGCCGTCGTCTTCTGCTGCGCCTCAGGGAATCGACGATTCCACATCTCCGTTTTCGATCTCGATGAAGGCGATCAAAGAGGGAGCGGCGAAAAAGAAGGGGCGTGAGACGTGGGTTGCGAAGAGTCAAAAGGGGGAGAAGAGGGTCTGTGTTCCCTCCTTGCAAGAACTGTGTCTCAAAATTCTCGCGGACAATGCTGATGCCATGGTTTCCCTTGAGGGTGTACCGGATGAGTTGAGGCACAAGCTTTGCAAACTGCTCTGTGACTCGAGAAAAATGAACAGTCACTTTCTTGAACTTCTTCTCAGCGGGTCTCCCACGGAGATTCGCCTGAGAGATTGCTCGTGGTTGACGGTGGAACAGTTCGCCGAATGTTTTCATTCGTGTGACACTGGAAGATTGGAGGTGCTGCAACTTGATCAGTGTGGAAGGTGTATACCTGATTATGCATTATTTGGTCCTCTGAGACAGTCACCATGGTGGTTGCCGAGACTAGTTAATCTGTCCCTCAGTGGTGCATGCCGTCTTTCAGACAAGGGTTTGCATGTGCTAGTTTCTTCTGCCCCATCACTAAGATCAATTAATCTAAGCCAGTGCTCCCTTCTCTCATCTGTCAGTGTCAATATTTTGGCGCATTCGTTGGGATCCCTACTGAAAGAGTTATATCTTGATGATTGCCTGACCATTGATGCTGCACAAATTGTGCCGGCATTGAAGAAACTCGAACATTTAGAAGTGTTGTCATTGGCTGGAATTCAAACTGTCTCTGATGAATTTATCGGGGATTACATCACTGCACGTGGTCACAACATGAAGGAGCTTGTTTTAAAGGACTGTAGGTAA 1728 0.4867 MTTGKCELCTKDEEAKKRRGEVWRERKEESRERERERESMVKYDRRECTMLPFNQATLTPKPLNHTPSPNHHQSPPPPPPPPSSSSSTAPTMTNTNSIIDSNPPNLEGDSDSDIDALINAFFEPNPQFPSLDHLQGSTSDAKESSLKRGLDTGDDSSHAPIPLKRGRIDNVIFPLADLHATFQIQNPTPSPFPLSQPLPHAAATNGDTQVVEGQGRRPVFDSDFLSRALREAESVFPQNSGDNDVNFDVEPGDFSAPYLSLNDFRRIRNMERFRQIAKESATHYARFTSEETADERPSSSAAPQGIDDSTSPFSISMKAIKEGAAKKKGRETWVAKSQKGEKRVCVPSLQELCLKILADNADAMVSLEGVPDELRHKLCKLLCDSRKMNSHFLELLLSGSPTEIRLRDCSWLTVEQFAECFHSCDTGRLEVLQLDQCGRCIPDYALFGPLRQSPWWLPRLVNLSLSGACRLSDKGLHVLVSSAPSLRSINLSQCSLLSSVSVNILAHSLGSLLKELYLDDCLTIDAAQIVPALKKLEHLEVLSLAGIQTVSDEFIGDYITARGHNMKELVLKDCR 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01499 575 SUPERFAMILY RNI-like 379 574 - -
Vimu7g01499 575 SMART LRR_CC_2 457 482 IPR006553 -
Vimu7g01499 575 SMART LRR_CC_2 483 508 IPR006553 -
Vimu7g01499 575 MobiDBLite consensus disorder prediction 127 162 - -
Vimu7g01499 575 MobiDBLite consensus disorder prediction 144 162 - -
Vimu7g01499 575 MobiDBLite consensus disorder prediction 284 312 - -
Vimu7g01499 575 MobiDBLite consensus disorder prediction 87 108 - -
Vimu7g01499 575 FunFam RNI-like superfamily protein 339 557 - -
Vimu7g01499 575 MobiDBLite consensus disorder prediction 1 112 - -
Vimu7g01499 575 Gene3D Ribonuclease Inhibitor 365 575 IPR032675 -
Vimu7g01499 575 MobiDBLite consensus disorder prediction 52 68 - -
Vimu7g01499 575 MobiDBLite consensus disorder prediction 7 45 - -
Vimu7g01499 575 MobiDBLite consensus disorder prediction 294 312 - -
Vimu7g01499 575 MobiDBLite consensus disorder prediction 69 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01499 Vimu-Chr7 14193964 14198883 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01499 K15082 - gmx:100798274 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01499 7 14193964 14198883 Vimu7g01499 7 14193964 14198883 ECH
Vimu7g01499 7 14193964 14198883 Vimu10g00462 10 3499985 3504953 PCT