Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01492 ATGGCGATATTCTCCGAATCGAATCACCATCACAACGCTTCCGATGGGGTGTCTCAGCGAGTCAACAGCCCGCGGTTCTCCGGCCCAATGACTCGCCGGGCCCACTCCTTCAAGCGCAACACTGACGGCGCCAACTCCAACGGCGGCTCCGGTGAGGTTGAGCTCCAAATCAATTCGCCCAGATCGGAAGAGCCGTCGGAGGGTGTTCCAGTGGGGAGGCACAGTCACAATCACGTGACCCAGAGAGTGCACGTCAGGGGGCTGCTGAAGAAGCCCCTTGCTTCCATCGTTGAGGATTTGGGGTTTAGGGAAAAGAAGAAAATTGGGCACTTGATGTTCTTGGCGTTCTGTGGGCTGTGCATCTTCATTGGTGTTCTCAAGATATGTGCCACTGGCTGGCTTGGATCTGCCATTGAAAGAGCTCAATCGGATAAGGAACTGCCTGACTCCATTCCTAGTCTAAATCTAATGGACAAAAGCTCCCTTGGTTATGCATATAGGGGGGAAGCAAGTGATGTTGAACGAACTTTAAAAACATTAGCAACGAGAGTAGGTGGCAGCCATACTGCCATGGCTGAAGATCCAGGGATCTGGTCTAAGCCCAACAGTGACAATTTCACCCAATGCATAGATCTTCCAAGTAATCGTAAAAAGCTAGATGCAAAGGTGAACGGCTACATTCTAGTAAATGCAAATGGTGGTCTGAATCAGATGAGATTTGGGATATGCGATATGGTTGCTGTTGCTAAGATTATGAAGGCAACGCTTGTTCTTCCTTCTCTTGATCATACCTCCTATTGGGCTGATGATAGTGGCTTCAAGGATTTGTTTGATTGGAAGTATTTTATTCATATGCTGAAGGATGATGTACACATAGTTGAGAAATTACCTCATGCTTATGCTGGAATTGAGCCTTTCCCAAAAACTCCAATATCTTGGTCCAAGGTTCCTTATTATAAGACTGAGGTTCTTCCCCTCCTAAAGCAGCACAAAGTGATCTATTTCACTCATACCGATTCCAGGCTTGCCAATAATGACATTCCACATTCCATACAGAAACTAAGATGCCGTGTAAATTACAGAGCACTGAAGTATTCAGCTCCAATTGAGGAATTTGGAAACACGCTAGTATCTAGGATGCAACAGAATGGAAGTTCATATGAGAAGGATATGCTTGCATTTACAGGATGCAGTCATAATTTGACTGCAGAAGAAGATGAAGAACTGAGACAGATGCGATATGAAGTCAGTCACTGGAAGGAGAAGGAGATTAATGGGACTGAGAGGAGATTGCTAGGAGGTTGTCCATTAACTCCAAGGGAAACTTCCCTATTGCTTAAAGCATTGGGTTTTCCATCACACACCAGGATTTATCTAGTAGCTGGAGATGCATTTGGAAGAGGGAGTATGAAATATCTCAAGGATGATTTCCCCAACATTTTCTCTCATTCCTCACTGTCCTCTGAAGAAGAGTTGAATCCTTTCAAGAATCATCAGAACATGTTGGCCGGTATAGACTATGTTGTCGCCCTAAAGAGTGATGTTTTTTTTTACACTTATGATGGAAATATGGCAAAGGCGGTACAAGGTCATAGGCGCTTTGAAAACTTCAAGAAGACCATCAATCCAGACAAGATGAATTTTGTTAATCTTGTTGATCAGTTGGATGAAGGAAAAATTTCATGGAAAAAGTTTAGCTCCAAGGTCAAAAAACTGCATGAAGACCGAATTGGTGCTCCATACCGAAGGGAACCTGGAGAATTTCCAAAGCTGGAGGAAAGTTTTTATGCAAATCCTCTGCCAGGATGTATTTGTGAAACAAGATAG 1827 0.4417 MAIFSESNHHHNASDGVSQRVNSPRFSGPMTRRAHSFKRNTDGANSNGGSGEVELQINSPRSEEPSEGVPVGRHSHNHVTQRVHVRGLLKKPLASIVEDLGFREKKKIGHLMFLAFCGLCIFIGVLKICATGWLGSAIERAQSDKELPDSIPSLNLMDKSSLGYAYRGEASDVERTLKTLATRVGGSHTAMAEDPGIWSKPNSDNFTQCIDLPSNRKKLDAKVNGYILVNANGGLNQMRFGICDMVAVAKIMKATLVLPSLDHTSYWADDSGFKDLFDWKYFIHMLKDDVHIVEKLPHAYAGIEPFPKTPISWSKVPYYKTEVLPLLKQHKVIYFTHTDSRLANNDIPHSIQKLRCRVNYRALKYSAPIEEFGNTLVSRMQQNGSSYEKDMLAFTGCSHNLTAEEDEELRQMRYEVSHWKEKEINGTERRLLGGCPLTPRETSLLLKALGFPSHTRIYLVAGDAFGRGSMKYLKDDFPNIFSHSSLSSEEELNPFKNHQNMLAGIDYVVALKSDVFFYTYDGNMAKAVQGHRRFENFKKTINPDKMNFVNLVDQLDEGKISWKKFSSKVKKLHEDRIGAPYRREPGEFPKLEESFYANPLPGCICETR 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01492 608 PANTHER OS02G0726500 PROTEIN-RELATED 104 606 - -
Vimu7g01492 608 MobiDBLite consensus disorder prediction 40 63 - -
Vimu7g01492 608 MobiDBLite consensus disorder prediction 1 26 - -
Vimu7g01492 608 FunFam O-fucosyltransferase 28 357 544 - -
Vimu7g01492 608 MobiDBLite consensus disorder prediction 1 77 - -
Vimu7g01492 608 Pfam GDP-fucose protein O-fucosyltransferase 226 534 IPR019378 -
Vimu7g01492 608 CDD O-FucT_plant 226 540 IPR024709 -
Vimu7g01492 608 PIRSF UCP009360 77 608 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01492 Vimu-Chr7 14112980 14119233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01492 154 605 Miscellaneous Gene Families AT2G37980 60.385 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01492 - - gmx:100801100 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01492 7 14112980 14119233 Vimu7g01492 7 14112980 14119233 ECH
Vimu7g01492 7 14112980 14119233 Vimu10g00461 10 3493321 3497093 PCT