Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00461 ATGGCGCACAATAGCAGCAACAGCACCGCGGCCGTGGATGGCGGTCGAGTCAACAGCCCACGTTACGTCGGCTCAATGACTCGCCGAGCCCACTCGTTCAAACGCAAGAACAACAACCATGAAATTGAGCTTCAAATCAACTCGCCCAGATCCCCCTTGGCTCCTGCTGAAGGGTCTGTTTTGAAAAGGAGTAATATTCACCATCATCACAATCATCATGTGAGCCACAAGGAGAAAAGGAACAAGTTTGGGCACTGGGTGTTTTTTCTCTTCTGTGGGGTGTGCTTTTTTGTGGGTCTTCTCAAGATTTGTGCCACTGCCTGGTGGTTCCGATCTTCAGTACACAGTACACTTGAATCCGTTCAGGAACTGTCTGACTCCATTAATAATCGAAATCTAATGGATCAAAGCTCCCATGGTTATGCACATAGGGAAGGAGCAAGTGAGGCTGAAAGAACCCAAAAGATGGTAACTGCAGGAACGATTGACAGCCACACTGACATGGCTGAAGAATCAGGAATCTGGTCTAATCCCAACTATGAGAATTTCGTCCAATGTATAGACCTGTCAAGAAATCATAAAAAGTTTGATGCGAAGACCAACGGCTACATTCTAGTTAATGCTAATGGTGGCCTGAATCAAATGAGATTTGGGATATGTGATATGGTTGCTGTTGCTAAGATTATGAAGGCAACACTTGTTCTTCCTTCTCTTGATCACACTTCGTACTGGGGTGATGCAAGTGGCTTCAAGGATTTGTTTGACTGGAAACATTTTATTGAGACACTGAAGGATGATGTCCAAGTAGTTGAGACATTACCACCCGCATATGCTGAAATTGAACCTTTCTCCAAAACTCCTATATCTTGGTCTAAGGCCAGTTATTACAAGAATGAGGTTCTTCCTGTACTAAAGCAGCACAAAGTGATCTATTTCACCCATTCTGATTCCAGGCTTGCTAATAATGGAATACCAAGCTCAATACAAAAACTAAGATGTCGTTTATCTGTCAGGTATGAGAAGGATATGCTTGCATTTACAGGCTGTAGTCACAATTTGACTGCAGAGGAAGATGAAGAACTACGGCAGATGCGATACGAAGTCGGTCACTGGAAGGAGAAGGAGATTAATGGAACTGAGAGGAGATTGGCAGGGGGTTGTCCATTAACTCCCAGGGAAACTTCCCTATTGCTTAGAGCACTAGGTTTTCCATCACAAACCAGGATTTATTTGGTAGCCGGTGAATCGTACGGTAGAGGAAGTATGAAATACCTTGAGGATGATTTCCCCAACATTTTCTCTCATTCCTCTCTGTCTTCCAAAGAAGAGTTGAATCCTTATAAGAATCACCAGAACATGTTAGCTGGTATAGACTATATTGTTGCACTTCAGAGTGATATATTTCTCTATACTTATGATGGGAATATGGCAAAAGCAGTACAAGGTCATAGGCGCTTTGAAAACTTCAAGAAGACCATCAATCCAGACAAGGCAAATTTTGTTAAACTCGTTGATAAGTTGGATGAAGGAAAGATTTCTTGGGAGAAGTTCAGGTCCAAGGTAAAAATACTTCACAAAGACCGAATGGGTGCTCCATATCTTAGGGAGCGTGGAGAATTTCCTAAGCTGGAGGAAAGTTTTTATGCAAATCCTATGCCAGGATGTATATGTGAAACAAAACAAGATTAG 1689 0.4263 MAHNSSNSTAAVDGGRVNSPRYVGSMTRRAHSFKRKNNNHEIELQINSPRSPLAPAEGSVLKRSNIHHHHNHHVSHKEKRNKFGHWVFFLFCGVCFFVGLLKICATAWWFRSSVHSTLESVQELSDSINNRNLMDQSSHGYAHREGASEAERTQKMVTAGTIDSHTDMAEESGIWSNPNYENFVQCIDLSRNHKKFDAKTNGYILVNANGGLNQMRFGICDMVAVAKIMKATLVLPSLDHTSYWGDASGFKDLFDWKHFIETLKDDVQVVETLPPAYAEIEPFSKTPISWSKASYYKNEVLPVLKQHKVIYFTHSDSRLANNGIPSSIQKLRCRLSVRYEKDMLAFTGCSHNLTAEEDEELRQMRYEVGHWKEKEINGTERRLAGGCPLTPRETSLLLRALGFPSQTRIYLVAGESYGRGSMKYLEDDFPNIFSHSSLSSKEELNPYKNHQNMLAGIDYIVALQSDIFLYTYDGNMAKAVQGHRRFENFKKTINPDKANFVKLVDKLDEGKISWEKFRSKVKILHKDRMGAPYLRERGEFPKLEESFYANPMPGCICETKQD 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00461 562 CDD O-FucT_plant 203 492 IPR024709 -
Vimu10g00461 562 PIRSF UCP009360 335 561 IPR024709 -
Vimu10g00461 562 PIRSF UCP009360 50 336 IPR024709 -
Vimu10g00461 562 Pfam GDP-fucose protein O-fucosyltransferase 337 486 IPR019378 -
Vimu10g00461 562 Pfam GDP-fucose protein O-fucosyltransferase 203 334 IPR019378 -
Vimu10g00461 562 PANTHER OS02G0726500 PROTEIN-RELATED 336 558 - -
Vimu10g00461 562 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00461 Vimu-Chr10 3493321 3497093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00461 89 561 Miscellaneous Gene Families AT2G37980 52.885 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00461 - - gmx:100807090 975.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00461 10 3493321 3497093 Vimu10g00461 10 3493321 3497093 ECH
Vimu7g01492 7 14112980 14119233 Vimu10g00461 10 3493321 3497093 PCT