Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01487 ATGAAATTCTTGTTTATTTGTGTCATGTTCATGAAGGCAGAGATGACTGGAATGTCCAAGGAAGAAGGGTCAGCTAGTCCTAGTTGGGGTGCTTCATTTTTTACGCAGACAAAAGAGGATGTAGCTAGAGCTGTTGCTGCTGCTGTTAACTCTCCAATGTCATCAAAAGATGATAATAGTGGTAGTCAACTTCAAAGGCTTCAGTATCAAGTTGCTCGAATGTTAAAAGGCTTTTCACACACTCCTGATGTTGAAAACACAAATTACAATCCTGAAATCCTGACTAGTCTGAAGCGTCAGTGGGCTGCAAACTTTCAGTTGCAGTATATGGACCATAAGACTTGGAAGGAGCCCTCACGATTATTTGAGAGCATGGTGATTGTCGGACTTCATCCTAATTGTGATGTTCAGGCACTGCAAAGGCAATATCTTGAAAGGAAGTTTGAAGGCTCTGCTAAATTAAGAAGTGCTCTTGGTTATCAGAGTCAATCTTGTGTAGAACCCAATATTGAACCTCAGGTCTTATTTGTTTACCCTCCAGAAAAACCACTGCCTCTTAAATGCAAAGATCTTCTTTCTTTCTGCTTCCCGGGAGGCTTAGAGGTCCGTGCTGTTGAGAGAACCCCTTCCATGAGTGAGTTGAATGAAATTCTTTTTGGGCAGGAACACCTTAAACAAAGGGATTTGTCATTTGTATTCAGGTTACAGGGTGCTGACAACTCAACACTTTATGGGTGTTGTGTCTTAGTTGAAGAACTAGTGGAAAAACCTTCTGGATTGCTTTCTCTGATTTCTGATAAGCAGCCTTCTTCCTCTTCTTTGAGACGACATATACTAACCACTCAGAGATGTTACTGCATTCTTTCAAGGCTTCCAGCTTTTGAATTGCACTTTGGTGTATTGAATAGCATCTTCACACAAGAAAGACTAGAGCGGTTGACAAGAAGTGTTGTAGATTTAAATTTAGAATTTGATGAAGGTAATAACTTAAAAGAAGAAAATCCAGAGGGTCACTCAGAGAGTGCTTTGGTGAGTGATGGCCCAATAGAAGATAGAATTGGTGAAAATCCAAGAATTTCTCCATTGAGAGCAGGAAATTCTACACCTGAAAACATTGTGGATGATGATCAACCAGAGCACTTAATGGTTGATGGGGAGCTGCAGAAATATAAGGAGAGAATCAACTATGATGATGTTTTGGTTGCTGATCATGTAACAGATAGTGCAACAGCTAAAGAAGATTCTGGCCCAACAATTTCTGAAACTAGTGATCAGTATGGAGATGCCTTTGCTACAAACAAACAGTCAGAAGACAAACATTTACCTAATGCTATTTTGCCCCTCCTGCGCTATTGCCAGTATGAAAGCTCTGAATCTTCCTGCAGTTTTCAAGGATCACCTTGTGAAGACAGAAATTTTAGGAGTGATGTTGATGATAATGAGACAGAAGAAGCATCTTTCTCCGGCCAAGAAGATTTGAATGACTTAAATGATATTCTTGAATGGGCAAAGGAAAATAACCATGGACCACTACAAATTATAAGTGAGTATTACCGTTTAAGTTACCCTGCCAGGGGCTCATCACTTACGTTTCATCCTTTGGAGCACTTGCATCCCTTGGAATATCAGAGATCAGCTGAGTCCGTATTACGTCTTGCTGGCTCAACAGTTGATTTGAAATCGTTCAGTACTGGTCTGGAACTAGTTGATGCACATATTGCTCTTGTGGTAGAAGAGGCAAATGCACTATCTGTATGGGCTGTAGCTTGCTTGTGCGGTACATTGAGACTTGAAAATGTGTTAACGTTCTTTGCAGGAGTTCTGCTAGAGAAGCAGATAGTTGTTGTCTGTTCTAATTTGGGAATCCTATCTGCTTCAGTTTTATCAGTTATTCCCCTAATCCAGCCTTACCGGTGGCAAAGCCTACTAATGCCAGTTTTACCAAATGACATGCTTGACTTTTTAGATGCACCTGTCCCTTATGTAGTTGGTATCAGGAACAAGACTAGTGAAGTTCAGTCAAAGTTTACCAATGTTATTCTAGTTGATGCTGATAGAAACCAGGTGAAGTCACCAACAATACCACAATTGCCAAGACAGAAAGAGCTAGTCTCTTCTTTACGTCCTTATCATTCAACTCTTGTTGGAGAAAGTTACTTGGGTAGGAGAAGGCCAGTATATGAATGCACGGAAATGCAGATTGAAGCTGCAAAGGGATTCCTTTCAGTGTTAAGATCTTACTTGGATTCTCTTTGCTGTAACATCCGTTCTCACACGATCACTAATGTACAATCCAATGACGATAAGGTATCATTGCTTCTGAAGGAGAGTTTCATTGACTCCTTCCCTTATCGGGATCGGCATTTTATGAAG 2373 0.4054 MKFLFICVMFMKAEMTGMSKEEGSASPSWGASFFTQTKEDVARAVAAAVNSPMSSKDDNSGSQLQRLQYQVARMLKGFSHTPDVENTNYNPEILTSLKRQWAANFQLQYMDHKTWKEPSRLFESMVIVGLHPNCDVQALQRQYLERKFEGSAKLRSALGYQSQSCVEPNIEPQVLFVYPPEKPLPLKCKDLLSFCFPGGLEVRAVERTPSMSELNEILFGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEELVEKPSGLLSLISDKQPSSSSLRRHILTTQRCYCILSRLPAFELHFGVLNSIFTQERLERLTRSVVDLNLEFDEGNNLKEENPEGHSESALVSDGPIEDRIGENPRISPLRAGNSTPENIVDDDQPEHLMVDGELQKYKERINYDDVLVADHVTDSATAKEDSGPTISETSDQYGDAFATNKQSEDKHLPNAILPLLRYCQYESSESSCSFQGSPCEDRNFRSDVDDNETEEASFSGQEDLNDLNDILEWAKENNHGPLQIISEYYRLSYPARGSSLTFHPLEHLHPLEYQRSAESVLRLAGSTVDLKSFSTGLELVDAHIALVVEEANALSVWAVACLCGTLRLENVLTFFAGVLLEKQIVVVCSNLGILSASVLSVIPLIQPYRWQSLLMPVLPNDMLDFLDAPVPYVVGIRNKTSEVQSKFTNVILVDADRNQVKSPTIPQLPRQKELVSSLRPYHSTLVGESYLGRRRPVYECTEMQIEAAKGFLSVLRSYLDSLCCNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDRHFMK 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01487 791 Pfam DENN (AEX-3) domain 556 687 IPR001194 -
Vimu7g01487 791 ProSiteProfiles Tripartite DENN domain profile. 152 791 IPR037516 -
Vimu7g01487 791 SMART DENN_cls 280 687 IPR001194 -
Vimu7g01487 791 MobiDBLite consensus disorder prediction 459 489 - -
Vimu7g01487 791 Gene3D - 583 749 IPR043153 -
Vimu7g01487 791 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 54 791 - -
Vimu7g01487 791 Pfam uDENN domain 172 249 IPR005113 -
Vimu7g01487 791 SMART uDENN_cls 118 251 IPR005113 -
Vimu7g01487 791 Gene3D - 109 320 - -
Vimu7g01487 791 MobiDBLite consensus disorder prediction 328 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01487 Vimu-Chr7 14073045 14087410 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01487 - - gmx:100801645 1398.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01487 7 14073045 14087410 Vimu7g01487 7 14073045 14087410 ECH
Vimu7g01487 7 14073045 14087410 Vimu10g00458 10 3447094 3455701 PCT