Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01482 ATGCTGCGTTTTAGAACGCCGTTGTTACATCCTTTTTCTCTGAGGTTCTCTGCCTCTAGACAGCTCGGTAAGGTTCAAGCACGCCCCTTCAGATCTTCCATCAAGATGACGTCAGCAAAAACGGTGGAGCACATTGTCCTTTTCAAGGTGAAGGAGGAGACGGAGGCGTCAAAGGTGAGTGAAATGGTGAACGGACTCGGTTCTCTCCTGTCTCTGGACACCGTCCTCCACCTCAGCGTGGGCCCGCTCCTCCGTAACCGATCCTCTTCTTTAACTTTCACTCACATGCTCCATACCCGCTACAAGTCCAAGGAGGATCTCCAAGCCTATTCCGCCCACCCCAGCCACGTCACCGTCGTCAAGGAAAACGTGCTCCCCATCATCGACGACATCATGGCTGTCGATTGGGTCGCCGATGGCCTCAGCAACCTCGTTCCGCCACCGGGCTCGGCGCTTCGTGTCAGCTTCTTGAAATTGAAGGAGGGCGCAGCTGGAGACGAGGTATTGGGTGTGGTTAGAGGAATTCCTGAGAATTTCAAGCAGATTAGTGAGTTCAGTTTTGGGGAGAATTTTTCGCCGGGGAGAGCCAAGGGTTTCTCGATTGCTTCGCTCGCGGTTTTCGCGGGACCGACCGAGTTGGAGGCCGTGGATTCGAATCAGGAGTTGGTGAATTACCAGAAGGACAAGGTTAGGGATCAGATCGACAGTGTGGTCGTTGTTGATTACGTGGTTCCGCCACCTCCTCCTGCCCAGAGTGCGAGCCTTTGA 768 0.5417 MLRFRTPLLHPFSLRFSASRQLGKVQARPFRSSIKMTSAKTVEHIVLFKVKEETEASKVSEMVNGLGSLLSLDTVLHLSVGPLLRNRSSSLTFTHMLHTRYKSKEDLQAYSAHPSHVTVVKENVLPIIDDIMAVDWVADGLSNLVPPPGSALRVSFLKLKEGAAGDEVLGVVRGIPENFKQISEFSFGENFSPGRAKGFSIASLAVFAGPTELEAVDSNQELVNYQKDKVRDQIDSVVVVDYVVPPPPPAQSASL 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01482 255 ProSiteProfiles Stress-response A/B barrel domain profile. 151 242 IPR013097 -
Vimu7g01482 255 Gene3D - 152 246 - -
Vimu7g01482 255 SUPERFAMILY Dimeric alpha+beta barrel 40 144 IPR011008 -
Vimu7g01482 255 Pfam Stress responsive A/B Barrel Domain 153 244 IPR013097 -
Vimu7g01482 255 Pfam Stress responsive A/B Barrel Domain 42 137 IPR013097 -
Vimu7g01482 255 SUPERFAMILY Dimeric alpha+beta barrel 152 247 IPR011008 -
Vimu7g01482 255 PANTHER - 39 246 IPR044662 -
Vimu7g01482 255 SMART Dabb_2 151 244 IPR013097 -
Vimu7g01482 255 SMART Dabb_2 42 138 IPR013097 -
Vimu7g01482 255 Gene3D - 33 139 - -
Vimu7g01482 255 ProSiteProfiles Stress-response A/B barrel domain profile. 42 136 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01482 Vimu-Chr7 14037817 14038584 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01482 - - gmx:100527770 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01482 7 14037817 14038584 Vimu7g01482 7 14037817 14038584 ECH
Vimu7g01482 7 14037817 14038584 Vimu10g00454 10 3397329 3398057 PCT