Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01477 ATGCTGGACAGATCAATTAGAGAGATAGAACGAGAAAGACAAGTTTTGCAGTCACAGGAGAAGAAACTGATTTTGGAGATAAAGAAAAGTGCCAAACAAGGCCAGATGGGAGCTGTTAAAGTGATGGCAAAAGATCTTGTTAGAACTAGACATCAGATAGAAAAGTTTTACAAGCTCAAATCGCAGCTCCAGGGTGTATCCCTCAGAATTCAAACTTTGAAATCAACACAAGCGATGGGTGAGGCAATGAAAGGGGTGACTAAGGCAATGGGACTGATGAACAGACAGATGAACTTGCCATCATTGCAGAAAATCTTACAGGAATTTGAGTATCAGAATGATAGGATGGAATTGATTGCAGAGGTGATGGGAGACACGATGGATGATGCTTTTGAAGGGGATGAGGAAGAAGAAGAAACAGAAGAACTGGTGAATCAGGTTCTTGATGAGATTGGTATCAACATCAACCAAGAGCTTCTGAATGCACCATCAACAGCTGTTGCTGCTCCAGCTGCAAAGACCAAAGTGCCTCAAGTTGAAACTGCTGGGGATGATGCCGCCCTAGATAGCAATTTACAAGCAAGGTTAGACAATTTAAGAAAAATGTAA 609 0.4171 MLDRSIREIERERQVLQSQEKKLILEIKKSAKQGQMGAVKVMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGLMNRQMNLPSLQKILQEFEYQNDRMELIAEVMGDTMDDAFEGDEEEEETEELVNQVLDEIGININQELLNAPSTAVAAPAAKTKVPQVETAGDDAALDSNLQARLDNLRKM 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01477 202 Coils Coil 2 26 - -
Vimu7g01477 202 Pfam Snf7 2 166 IPR005024 GO:0007034
Vimu7g01477 202 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 2 200 IPR005024 GO:0007034
Vimu7g01477 202 Gene3D - 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01477 Vimu-Chr7 13995702 13997038 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01477 K12191 - gmx:100819241 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01477 7 13995702 13997038 Vimu7g01477 7 13995702 13997038 ECH
Vimu7g01477 7 13995702 13997038 Vimu10g00446 10 3328490 3332048 PCT