Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01469 ATGTCTACAGCTGAAGGTGGTAAAAGTAGTGCTGAAGAGAACAATTTGCCATTAAAAGATGTTGAAACCGTAGACAAAGCTCTGCGCAGAGAGAAAAGCTCTTCCAAGAATTCAAAATCTTCGAAATCCCAGTTATTTGATCCAAAACCAAAGGTTAAAGATAGCGAAGAAGATAACTTACGTAAGGATAAGAAGTCTGTATGGAACTGGAAATCATTGAAGGCCCTTTCTCTGTCTCGCAGTAAGAAGTTCAATTGTAGTTTTTCTGTAAAAGTCCATGTGATTGAAGGGTTGCCTTCGAGTTTCAATGATTCTTTCCTTCGTGTGTATTGGAAGAGGAAGGATACGCTTTTGGTGACCCCTCCGTCCAAGGTGATTCAAGGTGTGGCTGAGTTTCAAGACATTTTGACACACACTTGCTCAATCAATGGAAGTAAGAGTGGACCCCAAAACTCTGCCAAATATGAAGCCAAGCCTTTTATGCTCTATGCTTCTAAGGCGGGTGTCCCAGAAGTTGATTTGGGGAAGCACAGAGTGGACCTCACAGGGTTGCTTCCTCTCACTCTGGAAGAGCTTGAAGAGGAGAAAAGGTCAGGGATATGGAGTACAAGTTTTAGACTATCAGGAACAGCAAGGGGTGCAGTAATGAATGTCAGTTTTGGGTATGTCATTGTTGGTGACAATACTAGTGCTGCCAGAGACAACCTTTGTGATCCTCTTAATGTACTAACTACCAAGAAAAATGGTATGCCTTTGTTGGAACCAGATAAAAAACCTAGTCAGGTTGATGGGAGTAAAGATTTGCCAAGCTTTTCCAGTGATGATTATTCATCTCAAAATGTAGATCAGGTGAAAGATCTTCATGAGGTTTTGCCATCATCAAATTCAGCTCGAACCAGCCCAGTATACATCTCATGTGAAGAATTTGTTGAAGAAAGGAGTTGTAGTCCTCTGCATGGCAAACCTGAACTCGAGGGAATTAAAGAAAACATCGACCCGATCAAACCAGTTGTTTGTTCTTCATTTGATAATGAAAAGGACAAGGCAGAAGAGAATCAAGGCGATGAGGGAAAAACATGCAGTCCAATGCATGACAAACCAGAAGTTTTTGTGTTTCAACAAAACCTGGACACAGTTACGCCACATGACTATCCTTTACCTGATTCTGGAATAGAAAATTTCAAAGAATGTGAAGGTAATAAATTTTCTGTTCTTGACAAGGGCATTGAATTTTCATCAGATGAACATGTTAAACTAGAGGAATCTATTGGAAAAGCTTTTATCGATGTCTACACAGTTGAAAGTACTCGGACCCTTGATAATACTGGTATACAGGTATCTTTTAAAGACCATGATAACCAAGATTCCCTTGAAGAACTAAACGACAGTTTTAAGGAAAGTGCTGTGGTACGTGAATTTTCTAATCGAAAGGATGACTTGCCAACGAAAGAACACCTACTGCAAGAACTAGAATCTGCTTTAACTAGTGTCTTAGAGTTGGAGACAGCGGCAATGGATTCTCCTGTAGCCATGGAAGCCAAATCTGAAGATAAGTTGAGAAAGTCAAAAAGCTGGGATGATGTTACAGAATCAGTTGCCAGTGAGTTTTTAAGTATGCTTGGCATAGACAATAGTCCAAGGGGTTTGAGTTTTGAAGGTGAGACAGAGTCTCCAAGAGAGCTCCTTTTAAGACAATTTGAGAATGAAGTTCGTTCAGAGGGCTTCTCTTTGTTTGATTTTGACATAGGCAGTGATGATGAAGCAGATAGTGGTAATGATTCTTCTTATGGATCTGAGCATTGGAAGTTCTCTAAGGATACTAAGTCAGCATCCTTAATGCAAGATGTACACAAAGGGCATCTAATCGAGTTTGAGGATGTGAGGAGCAAACAGAAGGTCCGTATGCTAGAACACTTAGAAACAAAAGCCTTAATGCGTGAATGGGGTTTGAATGAGATGGCTTTTCAGCATTCTCCTAAAAAAGATCATAATGGCTTAGGAAGTCCAATATATTTTCATCCCGAAGAGACTCTACCATTACCTCCTCTAGCAGAGGGGTTAGGTCCTTTTCTTCAGACCGAAGATGGGGGCTTTCTACGGTCAATGAATCCCACACTCTTCAGGAAAAGTAGAGCTGGTGGAACATTAATCATGCAGGTTTCCAACCCAATTGTGGTGCCCGCTGAAATGGGTACTGGGATAATGGAGATTTTGCAGTGTTTTGCTTCTGTGGGAATTGAAAAACTTTCCAAGCAGGCAAACAAGTTAATGCCTCTACAAGACATCACGGGAAAGACAATGCAACAAATATCAAGGGAAGCAAAGCCAGTCTTGGGGGGAATATACAGGCAATTACATTTGCAGCATAATTTGGTAACAAGACAGGATTCTACTTGTGCGCAGAAAGGCTTGAAGGGAATTCTATCTGGTGGACAAATGCCTAATAAGTTCAGTTCAGATTCAGCTGTAGACCACAGAAGCTCAGATCTTGCTCTATTGGCTATGGATAAAATTGAAGCACTTTCACTGGAGGGTTTGAGAATACAATCTGGGATGTCAAATGGGGATGCACCATCAAACATCATTGCAGAATCCTATGGGGATATTTCAGCTCTGCAAGGCAAGGGGGCTGGTACCAGGGGCTCCCTTGGGCTAGATGGATCTGCTGCCATGGAATTGTTGGATATGAAAAACAGAAACAGTGATGAATATGAAGGTGTTGACGGGATAATGGCCCTATCATTGACTCTAGATGAATGGATGAGGTTGGATTCTGGTGAGATTGATGATGATATAGACAACATCAGTGAGCATACATACAAACTTCTTGCTGCCCATCATGCAAACTCTTTTGACTTGATACGTGGGAAGAGTTCAAAGGGAGAGACAAAAAAAGGGAGGAAATATGGTTTGTTAGGAAACAAATTCATAGTAGCTATAATGGAGCAGCTTCGTGATCCTCTGAGAAACTATGAGCCTGTTGGGACACCAATGCTTGGTCTTATACAAGTGGAGAGAGTGTTCGTCCAACCAAAGCAAGAGATTTATAGGCCGTTGTGTGAGGCAGGGAAGGAAAGTGATGAGTGTGAAATAGTGGCGAAGGTGGAGATGAAGGGGAAGAGACAAGAGAAAAGTAGTGAAGAAGAGGGCATTCCTCAATTCAAAATTACAGAAGTGCATGTTGCAGGTGTGCAGAAAAGGAAGTTTTGGAGCAGTTGGGGACGACGGCGACAACAAGAACAATCTGCTTCCCGGTGGTTGATTGCTAATGGAATGGGGAACAACTTTAAGAATCCAGTGCTCAAGTCAAATGCTCCAATCACTACCACAAACGTGCAACCGGGTGACTCATTGTGGAGCATATCATCTCGTATTTATGGTACACTCACAAGATGGAATTGGTAA 3405 0.417 MSTAEGGKSSAEENNLPLKDVETVDKALRREKSSSKNSKSSKSQLFDPKPKVKDSEEDNLRKDKKSVWNWKSLKALSLSRSKKFNCSFSVKVHVIEGLPSSFNDSFLRVYWKRKDTLLVTPPSKVIQGVAEFQDILTHTCSINGSKSGPQNSAKYEAKPFMLYASKAGVPEVDLGKHRVDLTGLLPLTLEELEEEKRSGIWSTSFRLSGTARGAVMNVSFGYVIVGDNTSAARDNLCDPLNVLTTKKNGMPLLEPDKKPSQVDGSKDLPSFSSDDYSSQNVDQVKDLHEVLPSSNSARTSPVYISCEEFVEERSCSPLHGKPELEGIKENIDPIKPVVCSSFDNEKDKAEENQGDEGKTCSPMHDKPEVFVFQQNLDTVTPHDYPLPDSGIENFKECEGNKFSVLDKGIEFSSDEHVKLEESIGKAFIDVYTVESTRTLDNTGIQVSFKDHDNQDSLEELNDSFKESAVVREFSNRKDDLPTKEHLLQELESALTSVLELETAAMDSPVAMEAKSEDKLRKSKSWDDVTESVASEFLSMLGIDNSPRGLSFEGETESPRELLLRQFENEVRSEGFSLFDFDIGSDDEADSGNDSSYGSEHWKFSKDTKSASLMQDVHKGHLIEFEDVRSKQKVRMLEHLETKALMREWGLNEMAFQHSPKKDHNGLGSPIYFHPEETLPLPPLAEGLGPFLQTEDGGFLRSMNPTLFRKSRAGGTLIMQVSNPIVVPAEMGTGIMEILQCFASVGIEKLSKQANKLMPLQDITGKTMQQISREAKPVLGGIYRQLHLQHNLVTRQDSTCAQKGLKGILSGGQMPNKFSSDSAVDHRSSDLALLAMDKIEALSLEGLRIQSGMSNGDAPSNIIAESYGDISALQGKGAGTRGSLGLDGSAAMELLDMKNRNSDEYEGVDGIMALSLTLDEWMRLDSGEIDDDIDNISEHTYKLLAAHHANSFDLIRGKSSKGETKKGRKYGLLGNKFIVAIMEQLRDPLRNYEPVGTPMLGLIQVERVFVQPKQEIYRPLCEAGKESDECEIVAKVEMKGKRQEKSSEEEGIPQFKITEVHVAGVQKRKFWSSWGRRRQQEQSASRWLIANGMGNNFKNPVLKSNAPITTTNVQPGDSLWSISSRIYGTLTRWNW 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01469 1134 MobiDBLite consensus disorder prediction 248 279 - -
Vimu7g01469 1134 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 81 222 IPR019448 -
Vimu7g01469 1134 CDD LysM 1112 1133 IPR018392 -
Vimu7g01469 1134 ProSiteProfiles C2 NT-type domain profile. 76 224 IPR019448 -
Vimu7g01469 1134 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1133 IPR039614 -
Vimu7g01469 1134 MobiDBLite consensus disorder prediction 18 37 - -
Vimu7g01469 1134 MobiDBLite consensus disorder prediction 1 60 - -
Vimu7g01469 1134 MobiDBLite consensus disorder prediction 46 60 - -
Vimu7g01469 1134 MobiDBLite consensus disorder prediction 265 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01469 Vimu-Chr7 13938096 13941594 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01469 - - vra:106766502 2128.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01469 7 13938096 13941594 Vimu7g01469 7 13938096 13941594 ECH
Vimu7g01469 7 13938096 13941594 Vimu10g00438 10 3278443 3284306 PCT