Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01468 ATGGAGGAGTGGATAGGTGGATTACCGGGTCGGGTTGGGAAGGATCGAAAACATCACAAGAAGAAGGTTGATTTGCTTGTCGTCAATTGTGAGATAGTTCCAATCACAACACAACACCGCCTTTTCTCTCTCTCTGCCTTCGCCACTGTCTGTCTACTGAAAATTGAAATGTCTGATGCCGAAGACCATGCAGATGCAGCAGACTATCCCAACGGCGAATCTCCTCCAAAGCTGCCAAAGAGGTTCAGAGACAGATCTAAGATGTTGGTTTTTGCTTTTTACGATGTGGGTTCTCTTTTTCTTGTTGTTTCTGCGAAGGAGATGTTGTCCAAAAAAGCTGTGCACACCAAGCAAATGCTTTCCAAACAGGCTGTGAAGATTGCCAAACAAGCTGAGGAACACGAAAGGTTCATCAATAAGGTGACGCATCTCGTTGGCGTCCTCGGTTTTGGGGGGTTTTGCTTCCTTTTAGGGGCAAGACCCCAAGACATTCCCTATGTATATTGTGTGTTCTACGTCATCTTTGTTCCTCTGCGTTGGATATACTACAGGTTCAAGAAATGGCATTACTATCTGCTGGACTTTTGCTATTATGCCAATACAATATTCTTGGTTGATCTTCTTTTTTACTCAAAAAATGAGAAGCTTTTCATGGTTTGTTTTGCTTTTGCTGAGGGGCCCTTAGCATGGGCTTTGATTGTTTGGCGCTGCAGCTTGGTTTTCAGTTCTGTTGACAAAATTGAAGACACATCTCTTTGTGGGATTTCTCCACTGAAGGAAGACACAACAACTCCGGTCAATGAAGTGGCAATTATGGAACCAACAAGTCCAACTCCAGCCCATAAAAGCCAACCCTTCTATAGATTGAAAGGCTCCCTCAAATCTGGTTTTGAGAATTACATTACAGAAAGAATTGGCGGTGCATCGGCGAGGCAAGAAAGGGTGAGATTGCAACCAGCTTTTTGCAACGATGAGGGACATTTTTGTTGGGAAAGTCAGAGAACATACTTTGCAGGTTTGGTTTTCTTTACTATTCGATGGTGGGATCCTGCAACCTTCGAAGCCATGCATCCAGAGGGAACTGCTAGAAGACCTACGTGGCCTTACATTGAAGACAAATCATTTCTCTGGACATGGCTGTTTCTGGTTCTGTACTTCCTCATCGTCAACGTTTTGCGTAGGCAAAGGTTTTTAAGAGATCCCGAAGTGATGACTTCCTACAGGGAACTCTCAAAAAAGGCTCAAAAAGCAAACAACATATGGTGGCGCTTAAGTGGGTTGCTAGGGGATCAAAATCGCATGCTAATGTACATTTTTCTTCAAGGAATATTTACAGTGGCAACCATGGCACTGGCTGTGCCAATATTCTTGTCATATGAGTTGCATGTAGTTTTCCAGATACTGAAGGTTTCAGCTGCAATATGGAATGGTGGAAGTTTTCTGTTAGAAGTAATGCCAAGACAGGCCATTCTTAAGGAGAAAAGGAAATCAGAGATGCAACCTGTTGAAGCTCAATCCAACACTAACACTGATGGAAAAATGTTATCAAGTTAA 1554 0.4311 MEEWIGGLPGRVGKDRKHHKKKVDLLVVNCEIVPITTQHRLFSLSAFATVCLLKIEMSDAEDHADAADYPNGESPPKLPKRFRDRSKMLVFAFYDVGSLFLVVSAKEMLSKKAVHTKQMLSKQAVKIAKQAEEHERFINKVTHLVGVLGFGGFCFLLGARPQDIPYVYCVFYVIFVPLRWIYYRFKKWHYYLLDFCYYANTIFLVDLLFYSKNEKLFMVCFAFAEGPLAWALIVWRCSLVFSSVDKIEDTSLCGISPLKEDTTTPVNEVAIMEPTSPTPAHKSQPFYRLKGSLKSGFENYITERIGGASARQERVRLQPAFCNDEGHFCWESQRTYFAGLVFFTIRWWDPATFEAMHPEGTARRPTWPYIEDKSFLWTWLFLVLYFLIVNVLRRQRFLRDPEVMTSYRELSKKAQKANNIWWRLSGLLGDQNRMLMYIFLQGIFTVATMALAVPIFLSYELHVVFQILKVSAAIWNGGSFLLEVMPRQAILKEKRKSEMQPVEAQSNTNTDGKMLSS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01468 517 MobiDBLite consensus disorder prediction 495 517 - -
Vimu7g01468 517 PANTHER OS01G0585100 PROTEIN 105 247 IPR021261 -
Vimu7g01468 517 MobiDBLite consensus disorder prediction 501 517 - -
Vimu7g01468 517 Pfam Protein of unknown function (DUF2838) 140 247 IPR021261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01468 Vimu-Chr7 13930960 13937934 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01468 - - gmx:100784515 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01468 7 13930960 13937934 Vimu7g01468 7 13930960 13937934 ECH
Vimu7g01468 7 13930960 13937934 Vimu10g00437 10 3265026 3268267 PCT