Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00437 ATGGCTGTGTCTGATAACGAAGATCTTGCATCAGACTACACAGACAGCGAACCCTCTAAAAGGACAAGGCGTAGGTTCAGGGATAGGTCCAAGGAGGTCTTGTCCAAACAAGCTGTGAAGATAGTCAAACAAGCTGAAGAGCATGAAAGGTTCATCAACAAGGTGACTCATCTTTTGGGGGTTCTTGGCTTCGGTGGGTTTTGCTTCCTCTTCGGGGCAAAGCCACAAGCTGTTCCCTTGGTATATTGTTTGTTCTATGTCGTGTTTGTTCCTCTCCGTTGGATATATTACAGGTTCAAGAAATGGCATTACTACCTCCTGGATTTTTGCTATTATGCCAATACAATCTTCTTGATTTACCTTCTTTTTTATCCAAGGAATGAAAAGCTTTTCATGGTTTGCTTTTCATTCGCTGAGGGACCATTAGCGTGGGCTTTGATTGTTTGGCGCTGCAGTTTGGTTTTCAGTTCTTTTGACAAAATTGTCAGTGTTCTTATCCATCTTCTACCTGGATTAGTTTTCTTTTCTATTCGATGGTGGAATCCTGCAACCTTTGAAGCCATGCGACCAGAGGGAACTGCTGCAAGAGCTACATGGCCCTATGTTGAAGATAAATCCTATCTCTTTATGTGGTTGTTTTTGGTTCCCTTGGCAGTTTACATTCTGTGGCAGGTTCTATACTTCCTCATTGTCAATGTCTTGCGCAGACAACGGTTTTTAAGAGATCCTGAAGTCATGACTTCCTACAGGGAACTCTCCAAAAAGGCTCAGAAAGCAAACAATATGTGGTGGCGCTTAAGTGGCATACTAGGGGATCAAAATCGCTTGTTGATGTACATCATTCTTCAAGGCATATTCACTGTTGCAACCACAGCACTAACTGTTCCCATATTCTTGTCCTATGAACTGTCTGTGGTTTTCCAAATACTGAAGATTTCTGCTTCAGTGTGGAATGGGGGAAGCTTCCTGATAGATGTAATGCCTAGGCAGAACAGACTTGAAAAGTATAATTTCTGTGATCCTTCCAGAGACTGA 1035 0.4251 MAVSDNEDLASDYTDSEPSKRTRRRFRDRSKEVLSKQAVKIVKQAEEHERFINKVTHLLGVLGFGGFCFLFGAKPQAVPLVYCLFYVVFVPLRWIYYRFKKWHYYLLDFCYYANTIFLIYLLFYPRNEKLFMVCFSFAEGPLAWALIVWRCSLVFSSFDKIVSVLIHLLPGLVFFSIRWWNPATFEAMRPEGTAARATWPYVEDKSYLFMWLFLVPLAVYILWQVLYFLIVNVLRRQRFLRDPEVMTSYRELSKKAQKANNMWWRLSGILGDQNRLLMYIILQGIFTVATTALTVPIFLSYELSVVFQILKISASVWNGGSFLIDVMPRQNRLEKYNFCDPSRD 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00437 344 Pfam Protein of unknown function (DUF2838) 54 163 IPR021261 -
Vimu10g00437 344 PANTHER OS01G0585100 PROTEIN 10 331 IPR021261 -
Vimu10g00437 344 MobiDBLite consensus disorder prediction 1 28 - -
Vimu10g00437 344 MobiDBLite consensus disorder prediction 13 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00437 Vimu-Chr10 3265026 3268267 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00437 - - gmx:100805362 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00437 10 3265026 3268267 Vimu10g00437 10 3265026 3268267 ECH
Vimu7g01468 7 13930960 13937934 Vimu10g00437 10 3265026 3268267 PCT