Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01450 ATGGCGATTGCTGATCAGCCTCACACCATAGCCACTGCTGTCGAGCATTCTACCTTGCGCCGGAGGCCCACCGCCACCTCCGCTGGTGGTCTCTACAATTCACCGGAGTCCACCGACAGCTCCGGCGAAGACTTGGTCAAGGATTCCGGTTCCGATGACTTCATGGACACCGTGGACAGCGGGGTCGGCTATTCACAACCACCACAAAAGGCTGAGAATAAAACCTCCGTCCTCGACTTCGCTTACCGGCCTTCGGTCCCCGCTCACCGTAGAGTCAAGGAAAGTCCTCTCAGTTCCGACAGCATTTTCCATCAGCTGCAGAGTCACGCGGGCCTCTTCAACCTCTGTATCGTAGTACTTGTTGCAGTAAATAGCAGACTCATCATCGAGAATCTAATGAAGTATGGCTTTTTGATCAAGTCTGGCTTTTGGTTTAGTTCATATTCATTGAGTGACTGGCCCCTTTTCATGTGTTGCCTTTCTCTTGTGGTATTTCCTTTTACTGCCTTTTTAGTGGAGAAGTTGGCACAACGGAAGTGTATACCTGAATCAGTCGTTGTTCTACTTCATATAATTATTACCTCAGCTTCAGTTTTGTATCCAATTTTAGTGATTCTCAGGTGTGATTCTGCCTTTCTATCGGGTGTCACTTTAATGCTACTTTCTTGTGTTGTCTGGTTAAAATTGGTGTCTTATGCACATACGAACTATGATATGAGACAACTTACGAAATCAATTGAAAAGGGAGAAGCAGTACCCAATAGTGTGAATATGGACTATCCTTACAGTGTGAACTTCAAGAGCTTGGCATACTTCATGGTTGCTCCTACATTATGTTACCAGGTAGCAGTACTTTCAAATTGCTTAGAGGCACAACTATGTGGACTTCACCCACATGTCTTTGTTGTGAATATGTCTGAGCAAAGCTATCCTCGGACACCTTATATTCGAAAGGGTTGGGTGTTTCGTCAAGTTATCAAGCTGATAATATTTACAGGAGTTATGGGTTTTATTATTGAACAATACATTAATCCTATTGTACAGAATTCGCAGCATCCTTTTAAGGGAGACCTTCTTTATGCCATCGAAAGAGTTCTGAAGCTTTCTGTTCCAAATTTATATGTGTGGCTCTGCATGTTCTATTGCTTTTTTCACCTTTGGTTAAATATACTGGCAGAGCTTCTTCGATTTGGTGATCGTGAATTCTACAAGGACTGGTGGAATGCCAAAACTGTCGAAGATGTAAGTGTATTTGTTCTGATCAGGTGTTTTCTTACATTATTCTCAATTTTAATCAAAGAGATTTTTGACCTATTCTCTTCGCTTTCTGTATTTTTGGTGTTGCTGCTGCTTCCATCAGTATTGGAGAATGTGGAATATGCCTGTTCACAAATGGATGATCCGCCACCTATATTTCCCGTGTTTAAGGCAAGGTATACCAAAGGATATGCCTTTGTTTACCATCTCAGGTCGCCAGCCGTTGCTCTTTTATTTGCCTTCCTGGTTTCTGCTTTATTCCATGAGCTGTGCATTGCTGTTCCTTGCCACATATTCAAATTGTGGGCTTTCGGTGGAATTATGTTTCAGGTTCCTTTGGTCTTGATCACTCATCATCTGCAAAATAAATTCAGAAACTCAATGGTTGGAAATATGATTTTTTGGTTCATATTCAGTATCCTTGGACAACCTATGTGTGTACTGCTCTACTACCACGACTTGATGAATAGGAAAATCAAACTTGACCAGAGCTAG 1752 0.4235 MAIADQPHTIATAVEHSTLRRRPTATSAGGLYNSPESTDSSGEDLVKDSGSDDFMDTVDSGVGYSQPPQKAENKTSVLDFAYRPSVPAHRRVKESPLSSDSIFHQLQSHAGLFNLCIVVLVAVNSRLIIENLMKYGFLIKSGFWFSSYSLSDWPLFMCCLSLVVFPFTAFLVEKLAQRKCIPESVVVLLHIIITSASVLYPILVILRCDSAFLSGVTLMLLSCVVWLKLVSYAHTNYDMRQLTKSIEKGEAVPNSVNMDYPYSVNFKSLAYFMVAPTLCYQVAVLSNCLEAQLCGLHPHVFVVNMSEQSYPRTPYIRKGWVFRQVIKLIIFTGVMGFIIEQYINPIVQNSQHPFKGDLLYAIERVLKLSVPNLYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNAKTVEDVSVFVLIRCFLTLFSILIKEIFDLFSSLSVFLVLLLLPSVLENVEYACSQMDDPPPIFPVFKARYTKGYAFVYHLRSPAVALLFAFLVSALFHELCIAVPCHIFKLWAFGGIMFQVPLVLITHHLQNKFRNSMVGNMIFWFIFSILGQPMCVLLYYHDLMNRKIKLDQS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01450 583 PIRSF Oat_ACAT_DAG_ARE 306 416 IPR014371 GO:0008374
Vimu7g01450 583 PIRSF Oat_ACAT_DAG_ARE 479 581 IPR014371 GO:0008374
Vimu7g01450 583 PIRSF Oat_ACAT_DAG_ARE 11 283 IPR014371 GO:0008374
Vimu7g01450 583 PIRSF Oat_dag 305 415 IPR027251 GO:0004144|GO:0019432
Vimu7g01450 583 PIRSF Oat_dag 481 582 IPR027251 GO:0004144|GO:0019432
Vimu7g01450 583 PIRSF Oat_dag 15 284 IPR027251 GO:0004144|GO:0019432
Vimu7g01450 583 MobiDBLite consensus disorder prediction 19 40 - -
Vimu7g01450 583 MobiDBLite consensus disorder prediction 1 51 - -
Vimu7g01450 583 PANTHER STEROL O-ACYLTRANSFERASE 57 282 IPR014371 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01450 Vimu-Chr7 13781983 13791699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01450 80 577 Lipid Metabolism Gene Families AT2G19450 61.122 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01450 K11155 - qsa:O6P43_002732 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01450 7 13781983 13791699 Vimu7g01450 7 13781983 13791699 ECH
Vimu7g01450 7 13781983 13791699 Vimu10g00418 10 3148254 3152698 PCT