Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00418 ATGGCGATCTCCGATGCGCCTGAAAGCGTAGGCACCGCCACCGGTCAAACCGACTCAGATCTCAGATTGCTTTCTCTCCGCCGCAGGTCCAGCGCCACCTCCCCGGCCAGCTTCTTCGATGCCGAAGACGCCGCCAGAACTTCTGCCTCCCAGGAATCCTTCAACAACAAAAACGTCGAGGACAATAAAGATTGCAAGTCCAATCATGCAGCCTCTGATCATAATATTGTCAACAATGACGCTCGGAAAGAGCACGGAGAACAAGTCATCGATATCAAATACGCTTACCGTCCCTCCGTTCCTGCTCACCGCAGAATCAAGGAGAGCCCGCTCAGCTCCGATAACATTTTCAGACAGAGTCACGCAGGACTGTTCAATCTCTGCATAGTAGTTCTTGTCGCGGTGAACAGCAGACTTATCATTGAGAACTTAATGAAGTATGGTTGGTTAATTAAGTATGGCTTTTGGTTTAGTTCAAAATCATTGAGAGATTGGCCCCTCTTCATGTGCTGTCTTAGTCTTAACATATTTCCACTTGCTGCCTTTATAGTGGAAAGGTTGGCACAGCAAAAGTATATTTCTGAACGGGTTGTTGTTTTACTTCATCTAGTTATCTCAACTGTTGAATTATCCTACCCAGTTTTAGTAATACTCAGGTGTGATTCGGCTTTTGTATCCGGTGTCACGTTGATGCTATTTACTTGCATTGTGTGGTTAAAATTGGTGTCATATGCCCATACAAACTATGACATGAGAGCACTTGCTGTTTCAAAAGAAAAGGGAGAAACATTACCCAATACTTTGATTATGGAGCATCCATATACTGTGACGATCGGGAGTTTGGCATACTTCATGGTTGCACCTACATTGTGCTATCAGCTTCAGTTGTTATTGGTGTTTTTTTATGGAGAAAATGTGCTGTTCACTATATTTTTTGCTTGGTCAATAGGAAAAGAGCAGGAAGAAGATTGTAATATGTTCACCATGACAAGCTATCCTCGCACCCCTTCTGTTCGAAAGGGTTGGGTGTTTCGTCAACTTGTCAAGCTGATAATATTTACTGGAGTAATGGGATTTATAATAGAGCAATATATGAATCCAATTGTACAAAATTCACATCATCCTTTGAAAGGAAACCTTCTATATGCCATTGAAAGAATACTGAAGCTTTCTGTTCCCAATGTATATGTGTGGCTCTGCATGTTCTACTGCTTTTTCCATCTTTGGTGTGTATTTCCTCTCTCTTAA 1248 0.4239 MAISDAPESVGTATGQTDSDLRLLSLRRRSSATSPASFFDAEDAARTSASQESFNNKNVEDNKDCKSNHAASDHNIVNNDARKEHGEQVIDIKYAYRPSVPAHRRIKESPLSSDNIFRQSHAGLFNLCIVVLVAVNSRLIIENLMKYGWLIKYGFWFSSKSLRDWPLFMCCLSLNIFPLAAFIVERLAQQKYISERVVVLLHLVISTVELSYPVLVILRCDSAFVSGVTLMLFTCIVWLKLVSYAHTNYDMRALAVSKEKGETLPNTLIMEHPYTVTIGSLAYFMVAPTLCYQLQLLLVFFYGENVLFTIFFAWSIGKEQEEDCNMFTMTSYPRTPSVRKGWVFRQLVKLIIFTGVMGFIIEQYMNPIVQNSHHPLKGNLLYAIERILKLSVPNVYVWLCMFYCFFHLWCVFPLS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00418 415 MobiDBLite consensus disorder prediction 57 72 - -
Vimu10g00418 415 MobiDBLite consensus disorder prediction 49 72 - -
Vimu10g00418 415 PANTHER STEROL O-ACYLTRANSFERASE 47 295 IPR014371 GO:0008374
Vimu10g00418 415 MobiDBLite consensus disorder prediction 1 20 - -
Vimu10g00418 415 PIRSF Oat_ACAT_DAG_ARE 9 296 IPR014371 GO:0008374
Vimu10g00418 415 PIRSF Oat_ACAT_DAG_ARE 328 412 IPR014371 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00418 Vimu-Chr10 3148254 3152698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00418 91 409 Lipid Metabolism Gene Families AT2G19450 65.831 6.75e-148 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00418 K11155 - gmx:547982 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00418 10 3148254 3152698 Vimu10g00418 10 3148254 3152698 ECH
Vimu7g01450 7 13781983 13791699 Vimu10g00418 10 3148254 3152698 PCT