Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01444 ATGAGCAACGACAAGGATACCTTCAACGTCGCCGATCTCTCCTCTGTTCTCAACGAGGAAAATCGAGCAGACCTTGTCAATGCTCTTAAGAGCAAGATACAGAGTTTGGCTGGGCAGCATTCCGACATTCTCGAGTCGTTGTCCCCTAACGTCAGGAAGCGTGTTGAGGTTCTTAGAGAGATCCAGGGTCAACACGATGAATTAGAGGCTAAATTTTTTGAGGAGAGAGCAGCTCTCGAGGCCAAATACCAAAAATTGTATCAACCATTGTACACAAAGCGGTATGACATAGTAAATGGTGTTACCGAAGTGGAAGAAGCGGCAGTGAATGAAACAACACCCGATGGTGGGGACGATGAAGAGAAAGGAGTGCCTGCGTTTTGGCTTACTGCAATGAAAAACAATGAAGTGTTAGCTGAGGAGATTTCAGAGCGTGATGAAGGTGCTCTCAAGTTTCTGAAAGATATCAAGTGGAGCAGGATAGAAAATCCTAAAGGATTCAAGCTTGAGTTTTTCTTTGATACCAATCCTTATTTTACCAATACTGTCTTGACCAAAACATATCATATGATTGACGAGGATGAACCAATTTTGGAGAAAGCAATTGGGACTGAAATTCAATGGCTCCCAGGAAAATGCCTGACACAGAAAATTCTCAAGAAAAAGCCCAAGAAGGGTTCAAAGAATGCTAAACCAATTACCAAAACTGAAAATTGTGAAAGTTTCTTCAATTTCTTCAATCCACCACAAGTCCCCGAAGATGATGAAGACATCGATGAAGATGCGGCTGAGGAGCTTCAGAATCAGATGGAACAAGACTATGACATTGGGTCAACAATAAGAGACAAGATTATTCCCCATGCTGTCTCATGGTTTACTGGAGAGGCCATCCAGGGAGATGAATTTGGAGAACTAGAGGAGGACGAGGATGATGAAGATATCGAAGAGGACGACGATGAGGAAGACGATGAAGAGGACGAGGATGATGAAGATGATGAGGAAGAAAACAAGACTAAAAAGAGGGTATAA 1029 0.4276 MSNDKDTFNVADLSSVLNEENRADLVNALKSKIQSLAGQHSDILESLSPNVRKRVEVLREIQGQHDELEAKFFEERAALEAKYQKLYQPLYTKRYDIVNGVTEVEEAAVNETTPDGGDDEEKGVPAFWLTAMKNNEVLAEEISERDEGALKFLKDIKWSRIENPKGFKLEFFFDTNPYFTNTVLTKTYHMIDEDEPILEKAIGTEIQWLPGKCLTQKILKKKPKKGSKNAKPITKTENCESFFNFFNPPQVPEDDEDIDEDAAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQGDEFGELEEDEDDEDIEEDDDEEDDEEDEDDEDDEEENKTKKRV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01444 342 MobiDBLite consensus disorder prediction 294 342 - -
Vimu7g01444 342 MobiDBLite consensus disorder prediction 300 333 - -
Vimu7g01444 342 SUPERFAMILY NAP-like 30 294 IPR037231 -
Vimu7g01444 342 Gene3D - 45 104 - -
Vimu7g01444 342 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 33 315 IPR002164 GO:0005634|GO:0006334
Vimu7g01444 342 Gene3D Nucleosome assembly protein 119 295 - -
Vimu7g01444 342 Pfam Nucleosome assembly protein (NAP) 53 295 IPR002164 GO:0005634|GO:0006334
Vimu7g01444 342 FunFam Nucleosome assembly protein11 119 295 - -
Vimu7g01444 342 FunFam Nucleosome assembly protein 1-like 1 45 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01444 Vimu-Chr7 13741065 13743451 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01444 K11279 - gmx:100785314 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01444 7 13741065 13743451 Vimu7g01444 7 13741065 13743451 ECH
Vimu7g01444 7 13741065 13743451 Vimu10g00407 10 3081113 3083939 PCT