Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01426 ATGGCGGTGAAGAAGGCACGAATTGTGATCGTTGGAGCAGGAATGGCGGGCATCACTGCTGCCAACAGGCTTCACAGTGTGAGTGCCTCAAAGAACTTGTTTGAGGTGTGTGTTGTGGAAGGTGGAAACAGGATTGGTGGGAGAATCAACACTTCAGAGTTTGGTGGTGACCGAATTGAGATGGGTGCCACTTGGATCCATGGAATTGAAGGAAGTCCAATTCACAAAATAGCTCAACAAGTCCATGCGCTTCAGTCTGACCAGCCTTGGGAGTGCATGGATGGGAACGACAACAAGGCCACCACCATTGCTGAAGGTGGCTTTGTGCTAAACCCTTCCTTTGTTCACCCCATCACCGAGCTTTTCAACAATCTCATGGACCATGCTCAGGGAAAGATGTCAACAGCAACAACCAAGGGTGAGAGTGGAATACTCAGTGTCGGTTCTTTTCTCAGACAAGGCCTTGCTGCTTATTGGGGTTCATCGAAAGAGGAAAAGGAGCTCAAAGGGTTCGGAAAGTGGAGTAGGAAGTTGCTTGATGAAGCAATCTTTGCCATGCATGAGAACACGCAGAGGACTTTTACATCTGTTGCTGACTTGATGACTTTGGATTATGACGCAGAAAGTGAATACCAAATGTTTCCAGGGGAAGAAATCACAATTGGTAAAGGCTACTCAAGCATAATCGAATCGTTAGCATCTGTGCTACCACCTGGTTCGGTTCAGTTGGGAAGAAAAGTCACAAGAATCGAATGGCAACCCGAGAGACGCGAGGCCGTGAATATGGAAAATGGAACATGTTCTAGGCCCGTGGTGCTACATTTCTCTGACGGCTCTATTTTGTCTGCGGATCATGTCATTGTCACGGTTTCACTGGGAGTGTTGAAGGCTTCTATCCGTGATAATGATTCAGGTATGTCAATGTTCCATCCCCCTCTACCCGCCTTTAAGGTTGAGGCTATTTCAAGGCTTGGTTTTGGTGTTGTCAATAAGTTGTTCATGCAATTGAGTCCTCCTCATGGAACAAGAGACGAGCACTCCAGAGGGTTCCCCTTCTTGCAAATGGTTTTCCATTCATCTAACTCTGAATTGAGGCAGAAGAAAATACCCTGGTGGATGAGAAGGACTGCTACTCTTTGTCCTATCTACAACAATTCAAGTGTCCTCTTATCTTGGTTTGCCGGGGAAGAAGCTCTGGCACTCGAGTCTCTCAAAGATGAAGAGATCATTAAAGGGGTTTCAGACACAGTTTCATGTTTCCTGTCACAGTCAGTTGAGTTTTGCAACGGGAATGTGAATTCTGAAAAGCACTCCCACAAATATAAGGTTGAATTCAGTAAAGTGTTGAAGAGCCAATGGGGAACAGATCCTTTATTTTTAGGCTCATACAGTCATGTGGCAGTTGGATCAAGTGGAGATGATTTTGATAAAATGGCAGAACCTTTGCCAAAATGCAGCAGCAGCAGCAGCAGCCACCCTTCTGCTTCACCACCACTTCAAATCTTGTTTGCAGGGGAAGCAACCCACAGAACCCATTATTCCACAACTCATGGAGCTTACTTCAGTGGTCTTAGGGAAGCCAATAGGCTCATTCAACATTATTCACCCTGTTAA 1614 0.4591 MAVKKARIVIVGAGMAGITAANRLHSVSASKNLFEVCVVEGGNRIGGRINTSEFGGDRIEMGATWIHGIEGSPIHKIAQQVHALQSDQPWECMDGNDNKATTIAEGGFVLNPSFVHPITELFNNLMDHAQGKMSTATTKGESGILSVGSFLRQGLAAYWGSSKEEKELKGFGKWSRKLLDEAIFAMHENTQRTFTSVADLMTLDYDAESEYQMFPGEEITIGKGYSSIIESLASVLPPGSVQLGRKVTRIEWQPERREAVNMENGTCSRPVVLHFSDGSILSADHVIVTVSLGVLKASIRDNDSGMSMFHPPLPAFKVEAISRLGFGVVNKLFMQLSPPHGTRDEHSRGFPFLQMVFHSSNSELRQKKIPWWMRRTATLCPIYNNSSVLLSWFAGEEALALESLKDEEIIKGVSDTVSCFLSQSVEFCNGNVNSEKHSHKYKVEFSKVLKSQWGTDPLFLGSYSHVAVGSSGDDFDKMAEPLPKCSSSSSSHPSASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLIQHYSPC 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01426 537 SUPERFAMILY FAD-linked reductases, C-terminal domain 325 465 - -
Vimu7g01426 537 PANTHER FLAVIN MONOAMINE OXIDASE 7 535 - -
Vimu7g01426 537 Gene3D - 94 471 - -
Vimu7g01426 537 FunFam Putative polyamine oxidase 5 isoform A 472 529 - -
Vimu7g01426 537 Pfam Flavin containing amine oxidoreductase 15 531 IPR002937 GO:0016491
Vimu7g01426 537 Gene3D - 8 529 IPR036188 -
Vimu7g01426 537 SUPERFAMILY FAD/NAD(P)-binding domain 1 534 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01426 Vimu-Chr7 13580922 13583265 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01426 K12259 - gmx:100809633 922.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01426 7 13580922 13583265 Vimu7g01426 7 13580922 13583265 ECH
Vimu7g01426 7 13580922 13583265 Vimu10g00395 10 2951485 2953203 PCT