Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00395 ATGGTGGTGAAGAAGCCACGGATAGTGATAATTGGAGCAGGAATGGCAGGCCTCACAGCTGCCAACAAGCTCTACACTGCCACTGCCTCAAAGGACTTGTTTGAGCTATGTGTTGTGGAGGGTGGAAGCAGGATTGGTGGCAGAATCAACACCTCAGAGTTTGGTGGTGACCGTATTGAGATGGGTGCTACATGGATCCATGGAATTGGAGGCAGTCCAATTCACAAAATTGCTCAAGAAATCCACTCACTCCGCTCTGACCAACCTTGGGAGTGCATGGATGGGAACACTGATGAGGCCATCACCATTGCTGAAGGTGGCTTCCATCTCCACCCTTCCATTGTTGACCCCATTACAAAGCTCTTCAACAACCTCATGGAATATTCTCAAGGGAAGCTCAATGAAGCCACTGCAAAGGGTGAACTTGAAAGTTATCACAAGCTGGCTGCTTTGGCTGCTAAGGTTGCTTCCAACAGGTCTGGTAACAACAACCTTAGTATTGGCTCTTTTCTGAGACAAGGCCTAGAGACTTACCAGATTTCAAAGGAGCAAGAGGAGGTCAAAGGGTGTGGGGAGTGGAGCAGGAAGTTACTTGAGGAAGGAATATTTGGAATGCATGAGAACAACCAGAGGACCTATACATCAGCTGATGACCTCTTGACACTGGATTATAGTGCTGAAAGCGAGTACAGAATGTTCCCAGGTGAAGAAATCACAATTGCTAAAGGGTACTTGAGCATAATTGAGTCCTTAGCTTCTGTGTTGCCACCTGGTTTGATTCAGTTAGGTAGAAAAGTCACAAGGATTGAGTGGCAGCTTGATGAGAGGAAGGGTGTGGAAAATGGCTGTTGTTCTTCTAAGCCTGTGAAGCTGCATTTTTGTGATGGCTCCGTTATGTCCGCTGATCATGTCATTGTCACAGTTTCACTGGGAGTGTTAAAATCTGCTATTCGTGATGATTCAGGTATGTTCTGTCCTCCTCTTCCCTCTTCCAAAACTGAGGCAATTTCAAGGCTTGGCTTTGGGGTTGTTAACAAGTTGTTTATGCAATTAAGTCCAAAACATGGAGGAGGAAAACATGAATACCAACATGAACATGTAAATGAAGACTCCGACAAGGGGTTCCCTTTCCTGCAAATGGTTTTCCATTCACCTCAATCTGAAACGAGGCACAAGAAAATACCCTGGTGGATGAGGAGGACAGCCACCCTTTTCCCCATATACAACAATTCTAGTGTCCTCTTGTCTTGGTTTGTGGGGGAAGAAGCACTAGCACTTGAGTCACTCAAAGATGAGGAGATCATAAATGGAGTTTCATCCACAGTCTCGTGCTTTCTACAGCATTCTCAGTGGCAAAAGGGTTCCAGTTCACATAGATTGTGCAATGGGAATGCGAATTCTGAGGAGAGATCTCAAGAAAATGAGGTGAAGTTCAGTAAAGTCTTGAAGAGCAAATGGGGAACTGATCCCTTGTTTTTAGGCTCATACAGTTATGTTGCTGTGGGGTCAAGTGGTGATGATTTAGATGCAATGGCCGAGCCATTGCCAAAAGATAGCAGTTGTCAGCCTTGTGCTTCTTCTCCACTTCAAATTTTGTTTGCAGGGGAAGCAACTCACAGAACTCATTATTCCACAACTCATGGAGCTTACTTCAGTGGTCTCAGGGAAGCCAATAGGCTTCTTCAACATTATCATTGTGTTGGGATTTACAATAACTAG 1719 0.4508 MVVKKPRIVIIGAGMAGLTAANKLYTATASKDLFELCVVEGGSRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAQEIHSLRSDQPWECMDGNTDEAITIAEGGFHLHPSIVDPITKLFNNLMEYSQGKLNEATAKGELESYHKLAALAAKVASNRSGNNNLSIGSFLRQGLETYQISKEQEEVKGCGEWSRKLLEEGIFGMHENNQRTYTSADDLLTLDYSAESEYRMFPGEEITIAKGYLSIIESLASVLPPGLIQLGRKVTRIEWQLDERKGVENGCCSSKPVKLHFCDGSVMSADHVIVTVSLGVLKSAIRDDSGMFCPPLPSSKTEAISRLGFGVVNKLFMQLSPKHGGGKHEYQHEHVNEDSDKGFPFLQMVFHSPQSETRHKKIPWWMRRTATLFPIYNNSSVLLSWFVGEEALALESLKDEEIINGVSSTVSCFLQHSQWQKGSSSHRLCNGNANSEERSQENEVKFSKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDAMAEPLPKDSSCQPCASSPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCVGIYNN 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00395 572 Gene3D - 8 338 IPR036188 -
Vimu10g00395 572 FunFam Putative polyamine oxidase 5 isoform A 3 116 - -
Vimu10g00395 572 Gene3D - 92 450 - -
Vimu10g00395 572 Pfam Flavin containing amine oxidoreductase 15 561 IPR002937 GO:0016491
Vimu10g00395 572 SUPERFAMILY FAD-linked reductases, C-terminal domain 340 498 - -
Vimu10g00395 572 Gene3D - 458 568 IPR036188 -
Vimu10g00395 572 PANTHER FLAVIN MONOAMINE OXIDASE 6 566 - -
Vimu10g00395 572 FunFam Putative polyamine oxidase 5 isoform A 505 559 - -
Vimu10g00395 572 SUPERFAMILY FAD/NAD(P)-binding domain 3 564 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00395 Vimu-Chr10 2951485 2953203 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00395 K12259 - gmx:100783032 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00395 10 2951485 2953203 Vimu10g00395 10 2951485 2953203 ECH
Vimu7g01426 7 13580922 13583265 Vimu10g00395 10 2951485 2953203 PCT