Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01368 ATGGAGACAAAAATCGTGCTGTCAAAACCATTAACACTTGAAGGTGAAACAGACTCAGATGAGCATTGCGAAACTCCAAATATTCTGCAACGCATATTAAGTCTCTTCAAGAATATGCGCCAAGGATCTGATCTCTCATGCTTCAAGCTGCCACCTGTGTTGAACATGCCAAAGTCACAACTACAGTGCTATGCAGAATCAATATACTGCACAGCATCAGATTTGTTGAGCAACATTAACAGTGGGAAGAGTCCATTAGATAGACTTATATTCGTTGTGGCATGGACCATTTCTACCACACGCCCTCTAAGCTTTGGAGTTGCACCCTACAATCCAACTCTTGGTGAGACTCACCATGTTTCCAAACGAAACCTCAATCTCTTAATGGAGCAGGTTTCACACCACCCTCCTGTATCTGCCCTCTATGCCACTGATCACAACCAAAACATTCACATCACATGGTGCCACTCTCCGGTTTCAAAGTTCCATGGTACTTCAATAGAAACTAAGGTGCACGGCAAACGACAGTTGAAGCTTCACAATCATGGAGAGACCTATGAAATGAATTCTCCTAATCTAGTTATCAGAATTCTTCCAATCCCTGGGACTGAATGGGTCGGCAATCTCAGTATAAGGTGCCTAGAAACAGGTCTTGTGGCAGAATTAAACTACATGAGCCAATCTTTCTTTGGATTTGGGGGAGGTCGAAGACAGATTAAAGGAAAAATCTATCATTCATTGTCTACCAAGATTCTATACAAAGTTGAAGGTCATTGGGACAGAACTGTAACCGTGAAAAGTACATCTAACGCTGAAGAAAGAGTGATATACGATGCAAGAGAAGTTATTTCAGGGCTTCAAGCTCCTATTGTGATGAATCCAGAGAGTGTGTGGCCAACAGAAACAGCCGTTGTTTGGGGTGAGTTAAGCGAAGCCATCTTGAACAAAGACTGGGAAAAAGCAAGAGAAGCAAAGAAAACTGTGGAGGAAAGACAGAGGGAGCTTCTGAGAGAAAGAGAGGCAAAGGGGGAAAATTGGACCCCAAAACACTTCGTGGTGTCTTACAGCAAAGAAGAGGGTTGGAACTGTTCACCCATCAGAAAGTCTGTCCCTCACGCTCCAATTGTCACCTTGTAA 1137 0.4327 METKIVLSKPLTLEGETDSDEHCETPNILQRILSLFKNMRQGSDLSCFKLPPVLNMPKSQLQCYAESIYCTASDLLSNINSGKSPLDRLIFVVAWTISTTRPLSFGVAPYNPTLGETHHVSKRNLNLLMEQVSHHPPVSALYATDHNQNIHITWCHSPVSKFHGTSIETKVHGKRQLKLHNHGETYEMNSPNLVIRILPIPGTEWVGNLSIRCLETGLVAELNYMSQSFFGFGGGRRQIKGKIYHSLSTKILYKVEGHWDRTVTVKSTSNAEERVIYDAREVISGLQAPIVMNPESVWPTETAVVWGELSEAILNKDWEKAREAKKTVEERQRELLREREAKGENWTPKHFVVSYSKEEGWNCSPIRKSVPHAPIVTL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01368 378 FunFam Oxysterol-binding protein-related protein 4C 113 290 - -
Vimu7g01368 378 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 31 352 IPR000648 GO:0008289
Vimu7g01368 378 Gene3D - 298 372 - -
Vimu7g01368 378 Coils Coil 318 341 - -
Vimu7g01368 378 Pfam Oxysterol-binding protein 36 362 IPR000648 GO:0008289
Vimu7g01368 378 ProSitePatterns Oxysterol-binding protein family signature. 130 140 IPR018494 -
Vimu7g01368 378 FunFam Oxysterol-binding protein-related protein 4B 298 370 - -
Vimu7g01368 378 Gene3D - 111 288 - -
Vimu7g01368 378 SUPERFAMILY Oxysterol-binding protein-like 31 363 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01368 Vimu-Chr7 13093036 13101316 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01368 K22285 - gmx:100819769 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01368 7 13093036 13101316 Vimu10g00349 10 2441067 2444770 PCT