Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01358 ATGAGTACCGAAAAGATTCCTTCGCCAGCTTCTGCTTCTTCGTCTTCTTCGTCCACTGCTTCCAGTAACTACGAGGTCAGCAAGGGATTCAATGGCCTTGACAAGGTTATTCTTCGCGATGCTCGTGGAAGCTCTGCCGAGAGTCGTTTTGGATTTGCCAAGTCGATTTTTGTCGCCATTGTCGGTTGGGGAGTGCTGATCTCTATAGCTTTTACTGGATCGCCAGCTTCTGCTTCTTCGTCTTCTTCTTCCACTACTTCCAGTAACTACGAGGTGAGCAAGGGATTCAATGGCCTCGACAAGGTTATTCTTCGCCATGCTCGTGGAAGCTCGGCCGAGAGTGCTGATCTCGTTAGCTTTTACTGGATCGAGATTTGTTGTCAACTGAAGGATTTTGATCTGAAAACACTATTCCTAAGCAGTTTGATTTACCTTGTTTCATTTCTGTCTGATTTTCAGGTGTACTTATACGGTGGTCAAGTGACTTCTTGGAAGAATGACCAAGCCGAGGAATTGCTTTTTCTCAGCAGCAAGGCTATATTTAAGCCTCCAAAGGCAATTCGTGGAGGGATTCCACTATGTTTTCCTCAATTTTCAAACCTTGGTCCTCTTGATTCACATGGATTTGCTCGAAACCGGTTCTGGACCATTGATGATAATCCTCCACCATTTCCAACAAATACTTCGAGCAAAGCCTTTGTTGATTTGATTCTTAAACCCTCCGAGGACGACATCAAGATTTGGCCTCACAGTGAGGTGCGGGTGGAGGGGTTAGAGACGTTGGATTATCTTGACAACTTGCAGAAAAGGAAACGCTTTACTGAACAAGGGGATGCTTTAACATTTGAATCAGAAGTTGACAGGATATATCTCAGCACTCCTACAAAGATCGCAATTCTTGATCATGAGAAGAAGAGAACATTTGTATTACGTAAAGATGGTCTTCCTGATTCTGTGGTGTGGAATCCTTGGGATAAGAAAGCAAAGTCTATGCCTGATTTCGGTGATGATGAGTATAAGCATATGCTTTGTGTAGAGGCTGCTGCTATTGAAAAGCCTATTACTTTGAAACCTGGCGAGGAATGGAAAGGAAGACTCGAACTTTCAACTGTTCCTTCTAGTTATCGTAGTGGACAGCTTGATCCCCGAAAAGTTATTCATGGAAGCTGA 1170 0.4385 MSTEKIPSPASASSSSSSTASSNYEVSKGFNGLDKVILRDARGSSAESRFGFAKSIFVAIVGWGVLISIAFTGSPASASSSSSSTTSSNYEVSKGFNGLDKVILRHARGSSAESADLVSFYWIEICCQLKDFDLKTLFLSSLIYLVSFLSDFQVYLYGGQVTSWKNDQAEELLFLSSKAIFKPPKAIRGGIPLCFPQFSNLGPLDSHGFARNRFWTIDDNPPPFPTNTSSKAFVDLILKPSEDDIKIWPHSEVRVEGLETLDYLDNLQKRKRFTEQGDALTFESEVDRIYLSTPTKIAILDHEKKRTFVLRKDGLPDSVVWNPWDKKAKSMPDFGDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLELSTVPSSYRSGQLDPRKVIHGS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01358 389 SUPERFAMILY Galactose mutarotase-like 152 368 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vimu7g01358 389 CDD D-hex-6-P-epi_like 154 369 IPR025532 -
Vimu7g01358 389 Gene3D - 252 376 IPR014718 GO:0030246
Vimu7g01358 389 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 251 374 - -
Vimu7g01358 389 Pfam Aldose 1-epimerase 249 368 IPR008183 GO:0005975|GO:0016853
Vimu7g01358 389 Gene3D - 145 251 IPR014718 GO:0030246
Vimu7g01358 389 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01358 Vimu-Chr7 12942446 12947890 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01358 K01792 - gmx:100787970 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01358 7 12942446 12947890 Vimu10g00332 10 2279919 2284909 PCT