Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00332 ATGAGTGGCGAAAAGGAAAAAACCTCTGCACCATCTTCTTCGCCTTATGTTGAGTTCTGCAAAGGAGTCAATGGCCTTGACAAGGTTATCCTCCGCGAATCGCGTGGCTCCTCCGCCGAGGTGTATCTGTACGGTGCACACGTGACGTCGTGGAAGAACGACCACGGCGAGGAATTACTTTTTCTCAGTAGTAAGGCTGTATTTAAGCCTCCAAAGGCAATTCGGGGAGGGATTCCAATTTGCTTTCCTCAATTTGGAGGCCTTGGCACTCTTGACCAACATGGATTTGCTAGAAATCGATTGTGGAGCATTGATGATGATCCTCCTCCATTTCCAACAAATACGTTGAGCAAAGCCTTTGTTGATTTGATACTTAAGACCTCTGAAGAAGACTCAAAAAATTGGCCTCACAGTTTTGAATACCGTCTTCGGATAGCTTTGGGACCAGGAGGAGATCTGATGTTGACATCACGGATCAGGAACACAAACAGCGAGGGAAAACCATTTTCGTTCACCTTTGCATACCATACATATTTCTCTGTATCAGACATAAGTGAAGTTCGAGTGGAGGGATTGGAGACTTTGGATTATCTCGATAATTTGCAGAACAAGGAACGTTTTACTGAACAGGGGGATGCTTTAACGTTTGAATCAGAAGTTGACAAGATATATCTTAGCACTCCTACAAAGATTGCAATTATTGATCATGAAAAGAAGAGAACATTTGTTGTCCGTAAAGATGGCCTTCCTGATGCTGTGGTGTGGAATCCTTGGGATAAGAAAGCAAAGGCTATGGCTGATTTTGGTGATGATGAGTACAAGTATATGCTGTGTGTAGAGGCTGCTGCTATTGAGAAGCCTATCACTTTGAAACCTGGGGAAGAATGGAAAGGAAGGTTAGAGCTTTCAGCTGTTCCCTCTAGTTATTGCAGTGGACAACTTGATCCCCAGAGAGTTCTTCTGGGAAGCTGA 972 0.4403 MSGEKEKTSAPSSSPYVEFCKGVNGLDKVILRESRGSSAEVYLYGAHVTSWKNDHGEELLFLSSKAVFKPPKAIRGGIPICFPQFGGLGTLDQHGFARNRLWSIDDDPPPFPTNTLSKAFVDLILKTSEEDSKNWPHSFEYRLRIALGPGGDLMLTSRIRNTNSEGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQNKERFTEQGDALTFESEVDKIYLSTPTKIAIIDHEKKRTFVVRKDGLPDAVVWNPWDKKAKAMADFGDDEYKYMLCVEAAAIEKPITLKPGEEWKGRLELSAVPSSYCSGQLDPQRVLLGS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00332 323 CDD D-hex-6-P-epi_like 29 303 IPR025532 -
Vimu10g00332 323 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 18 308 - -
Vimu10g00332 323 Gene3D - 24 309 IPR014718 GO:0030246
Vimu10g00332 323 PIRSF PHexose_mutarotase 4 309 IPR025532 -
Vimu10g00332 323 Pfam Aldose 1-epimerase 28 302 IPR008183 GO:0005975|GO:0016853
Vimu10g00332 323 SUPERFAMILY Galactose mutarotase-like 22 302 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vimu10g00332 323 FunFam Glucose-6-phosphate 1-epimerase 24 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00332 Vimu-Chr10 2279919 2284909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00332 K01792 - gmx:100807970 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01358 7 12942446 12947890 Vimu10g00332 10 2279919 2284909 PCT