Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01257 ATGGTTCGCTTCAGCAACAACATTATCGGACTCCTCAATTTCCTCACCTTCCTCCTCTCCATCCCGATCCTGGGGGGCGGAGTGTGGCTCACCAAGCACGCCAGCACCGAGTGCGATCGCTGGCTGGAGAAGCCCGTCATCGCAATCGGTGTTTTCTTAATGGTCGTTTCACTCGCTGGCCTCATCGGCGCGTGCTGTCGCGTCACATGGCTTCTCTGGCTCTACCTACTCGTCATGTTCTTGCTCATCGTTATTCTCTTTGCCTTCACCATCTTCGCCTTCGTTGTCACCAACAAGGGCGCTGGTGAGGCCGTGTCTAACAGAGGCTATAAGGAGTATAGGCTCGGGGATTACTCCAATTGGTTGCAGAAAAGGGTGAACAACCAGAAGACGTGGGACAGGATCAAGAGTTGCTTACAGTCTGGGAAAGTCTGTACTGAATTCCAAGACAAGTTCCTAAACGACACCTTTACTCAGTTCTACACCGAGAACCTCTCCGCGCTTCAGTCCGGGTGTTGTAAGCCTGCTGATGAGTGCAATTTTACCTATGTGAATCCAACTACATGGACAAAGACCGCAAATGCTACTCTTAACAACCCTGACTGTAGTGCTTGGGATAACAATCCCAACACTCTGTGTTTCAATTGCCAATCATGTAAGGCTGGCTTACTGCAAAACCTGAAGACCGATTGGAAGAAGGTGGCTGTTATTAACATCGTAGTCCTGGTCTTCCTCGTTATTGTCTACTCCATAGGTTGTTGTGCTTTCAGGAATAACAGGAAGGAGAATTGGAAGAGATATTAG 804 0.4913 MVRFSNNIIGLLNFLTFLLSIPILGGGVWLTKHASTECDRWLEKPVIAIGVFLMVVSLAGLIGACCRVTWLLWLYLLVMFLLIVILFAFTIFAFVVTNKGAGEAVSNRGYKEYRLGDYSNWLQKRVNNQKTWDRIKSCLQSGKVCTEFQDKFLNDTFTQFYTENLSALQSGCCKPADECNFTYVNPTTWTKTANATLNNPDCSAWDNNPNTLCFNCQSCKAGLLQNLKTDWKKVAVINIVVLVFLVIVYSIGCCAFRNNRKENWKRY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01257 267 PRINTS Transmembrane four family signature 39 65 - -
Vimu7g01257 267 PRINTS Transmembrane four family signature 66 94 - -
Vimu7g01257 267 PRINTS Transmembrane four family signature 7 30 - -
Vimu7g01257 267 Pfam Tetraspanin family 7 255 IPR018499 GO:0016020
Vimu7g01257 267 ProSitePatterns Transmembrane 4 family signature. 50 72 IPR018503 GO:0016020
Vimu7g01257 267 PANTHER TETRASPANIN-8-RELATED 3 262 IPR044991 GO:0009734|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01257 Vimu-Chr7 11961821 11963987 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01257 1 263 Miscellaneous Gene Families AT2G23810 67.681 3.65e-135 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01257 - - gsj:114382334 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01257 7 11961821 11963987 Vimu7g01257 7 11961821 11963987 ECH
Vimu7g01257 7 11961821 11963987 Vimu10g00745 10 6481180 6482620 PCT