Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01147 ATGGACGCTGTAGCAACAGGTTCGGAGCTGAACAAGTCCGGGAGCGGAGGTTCGGAGCGGAGCGATGACAGCGGAGGAGGAGGGATATTTGAGTACTCTGGTTGGGTTTATCACTTGGGAGTCAATTCCATTGGCCACGAGTACTGTCATCTCCGTTTCCTCTTCATTAGGGGAAAGTATGTTGCCATGTACAAGCGTGATCCTCACGAGAACCCTGGCATCAGTATAATGGAAATAGGAATCAGTTTATGGAAGCTTGATACGATTAATGTTGCTGCTGCTGATTTGAAATTGAGAATCGTTTTAGGACGAAGAACCAAGAGTTTTGCAAAACCAATTAGGCGGGGAGTTGTTGGACCCACGCTAATGGTGGAGGAGCTAGGTCGTCGAAAGGTCAACAATGGGGATCTTTATGTTTTACGGTTTTACAATCGATTAGATGAGACCAAAAAAGGAGATATTGCTTGCGCTACAGCTGGTGAGGCCAGGGGATGGATGGAAGCATTTGATCAGGCTAAGCAACAGGCCGAGCTTGAGCTGTCAAAAGGAATTAGTGCCAGAGACAAACTAAACATGGAGAACGAGTATGCTCCCCCTTTTGAAATGCATTTGATCAATCTTGAAGGACATCGACCTAGAGTGAGGCGATATGCCCATGGTTTGAGGAAGCTCATAAGAATTGGCCAAGGCCCAGAAAAATTGTTACGACAATCATCAAAGTTGTCCAGAACAGATGGGTTTGAAGGGGATGGAGGCGATGCAGTTGAAGCACATCAATGGAAATGCGTTTTTACTTTGGCTGGTATTAGAATTTTTGAGGATGTTTCTGATCACAAGGCCATAAAGAATGGCTTCAATGTGGTCTTCTGTGGTGAGAGTAGATTCGATGGCAGCCAGGGTATCAACAATCTTCTTGATATCAAGAAGATAGGTGGCATCGGTTCTCTCATTTTTAGGTGTACAAAGTTGAATCTTTCAGGATTTTACCTTTTGCTCTTGATTGGGATGTGTGATAAACATGCAACTTATTCTAGATTTGAGAAGCAGTGTCCTTTGATTGGCAAGCACTTCTTGTTGTCAGCTGAAGAAATTTTCAGTTTTAAGCTTGAGAGAGATCGTTATGTTGAAAGTGTGAGGGTGAATGGTAAGACTGTCCTTGCAAAGTCTGTTGGTGTTATTGATGCAACTGCAGATACTGTTTTTGAAGTTATTTTGAACACTGACCAACAAAAAAGATATGAGTGGGATACATTGATATGCGACTTGGAACTTGTAGATTCTTATGATGGACACTACGATGTTGTTTATGGGACATATGATTCTAAGTATCTATCTCGGTGGCACTCAAAGCAGGATTTTGTCTTCTCTAGACAATGGTTTCGTGGACAAGATGGAACATATACAACTTCATGGGAGATTAGAAATTTGAGCACATCTGGGGCATCAAATAGCCCAAGATGTTTAGTGACCCACACTTTAGAGATAAACTCTTCGTCTTGGTGTCGATGGAAGAATAACCAGAACTCAAAATTTCAGAGGAGCATTCCACATGCATTACTGTTCCAAGTGGCAGGTCTGAAGGAATACATTGCTGCCAATCCTGCACTCCACCAAGAAAATGCCACCACAGTTGTTCATTCCAAAATCTCTGATGCTTCTATTTCTAGTGCTGAATGTGAGGATGAAATGCAGGATGAGTTTTATGATGCAATTACTGCTGATTCGTCAACATCAGATGAAGAAAGTGATGATGATCAAAAACTTGTTGTGCAGGAGCCAAGAGTCAAGCTAAAGAATATTTCATGGGCAATCACAACATTAGCTTTAAAGCGAACTGCTGCTCCTGATCTCAGCGAAGAATTGGATCCTCATGTAACTCCTATCACAATTCCAAGTGACTTGCATTGTTCTTTATGGAAAGGAAAGGATGACAATGACACAAACTGTTGGGCTTCTCCTAGTGGAAAAGGATTTATGATTAGAGGAAAGAACTATCTTAAAGATAGTTCTAAGGTAGTTGGAGGAGATCCTCTTCTCAAGCTTGTAGGAGTCGATTGGTTAACAGTTGATAAATCTGTAGATAGAATTGCCCTTCACCCTAACTGTTTGGTTCAGTCAGAAGCCGGGAAAAAGCTTCCATTTATCCTTGTCATTAATCTCCAGTTTGAAAAGTCTACTGCTGGCATATTATTGCTTTTGACATTGAATGAACAATTGAGTAGCTTTACTACTAGTAGTGTCAGGGCTGCCAACTTTGACCGACAAGTTCCTGCCAAACCAAACTACAGTCTGGTTCTGTATTATGCAGCTGACAGACCGATAAATAAAAATTCTTTGTTAGCTAAGTTTGTTGGTGGAAGTGATGCATTTCGGGACTCCAGATTCAAGCTAATTCCTAGTATAGTTGAGGGATATTGGATGGTCAAGAGAGCTGTAGGAACCAAAGCTTGCCTCTTGGGAAAAGCCATTGATGTGGACATCGGATCGTCTTCTGTAGCCAGAAGTGTCATAGGCCTTGTCCTGGGATATGTTACGAGTCTTGTTGTCGACCTTGCAATTTTGATAGAGGCAAAAGAAGAATCGGAGCTGCCAGAGTATATTCTTGGAACTGTCCGATTAAACCGTTTGAAACCTGAATCTGCTGTACCATTGGAAGCTTAA 2661 0.4198 MDAVATGSELNKSGSGGSERSDDSGGGGIFEYSGWVYHLGVNSIGHEYCHLRFLFIRGKYVAMYKRDPHENPGISIMEIGISLWKLDTINVAAADLKLRIVLGRRTKSFAKPIRRGVVGPTLMVEELGRRKVNNGDLYVLRFYNRLDETKKGDIACATAGEARGWMEAFDQAKQQAELELSKGISARDKLNMENEYAPPFEMHLINLEGHRPRVRRYAHGLRKLIRIGQGPEKLLRQSSKLSRTDGFEGDGGDAVEAHQWKCVFTLAGIRIFEDVSDHKAIKNGFNVVFCGESRFDGSQGINNLLDIKKIGGIGSLIFRCTKLNLSGFYLLLLIGMCDKHATYSRFEKQCPLIGKHFLLSAEEIFSFKLERDRYVESVRVNGKTVLAKSVGVIDATADTVFEVILNTDQQKRYEWDTLICDLELVDSYDGHYDVVYGTYDSKYLSRWHSKQDFVFSRQWFRGQDGTYTTSWEIRNLSTSGASNSPRCLVTHTLEINSSSWCRWKNNQNSKFQRSIPHALLFQVAGLKEYIAANPALHQENATTVVHSKISDASISSAECEDEMQDEFYDAITADSSTSDEESDDDQKLVVQEPRVKLKNISWAITTLALKRTAAPDLSEELDPHVTPITIPSDLHCSLWKGKDDNDTNCWASPSGKGFMIRGKNYLKDSSKVVGGDPLLKLVGVDWLTVDKSVDRIALHPNCLVQSEAGKKLPFILVINLQFEKSTAGILLLLTLNEQLSSFTTSSVRAANFDRQVPAKPNYSLVLYYAADRPINKNSLLAKFVGGSDAFRDSRFKLIPSIVEGYWMVKRAVGTKACLLGKAIDVDIGSSSVARSVIGLVLGYVTSLVVDLAILIEAKEESELPEYILGTVRLNRLKPESAVPLEA 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01147 886 Gene3D - 369 512 IPR023393 -
Vimu7g01147 886 ProSiteProfiles START domain profile. 260 467 IPR002913 GO:0008289
Vimu7g01147 886 CDD START 355 468 - -
Vimu7g01147 886 SUPERFAMILY Bet v1-like 380 500 - -
Vimu7g01147 886 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 650 876 IPR009769 -
Vimu7g01147 886 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 46 885 IPR045096 -
Vimu7g01147 886 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01147 Vimu-Chr7 11147371 11164039 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01147 - - gmx:100801191 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01147 7 11147371 11164039 Vimu7g01147 7 11147371 11164039 ECH
Vimu7g01147 7 11147371 11164039 Vimu10g00732 10 6308728 6319839 PCT