Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00732 ATGGAGGCGTCGTCGAGTGGAGAAGCCTCTGAGCGCGGCGTCGAAGAGAAAGGAACATTCCAATACTTTGGTTGGGTTTATCACGTTGGCGTCAATTCCGTCGGCCGCGAGTACTGCCACCTCCGATTCCTCTTGATCAGAGGCAAGTGCGTTGCCATGTACAAGCGTGATCCTCACCAGAACCCTGACATCAAACCCATCCGACAGGGAGTCATAGGTGCCACACTAGTGGTCGAGGATCTAGGATGTCGGAAGGTCAACAATGGGGATCTTTATGTAGTACGATTCTACAGTCGACAAGAGGAGGGTAGAAAAGGAGAAGTAAGTTCCCTTCTCTTTTCTCAATCTCAGTATTTGCTTAGGATCGATCTACAAGGAAATCGACATAAACTGAAACGATATGCCTCTGGGTTGAAGAAGCTTAAAAAAATTGGCCAAGGCCCAGAGACACTTTTACGTCTATCGTCAAAGTTTTTTGGTAATTCAGATTGCTTTGAAGGGGAAACTGGAGATGTATTTGATATACATCAATGGAAATGTGTTCGTACTATGTCGGGCATTAGAATCTTTGAGGATGTTTCCGATCACAAGGGCGCCCTTGTTAAGTCTGTTGGTGTTATTGATGCGCCTGCAGATAGTGTGTTTGAAGTGTTTTTAAACACTGAGCGACAAAAAAGATACGAGTGGGATATGTTAATGGGTGACTTGGAGTTGGTAGAGACTTATGATGGACATTATGATGTTGTTTATGGAACATATGATCCTAAGTATCTAACTCGGTGGCATTCAAAGCGGGATTTTATCTTCTCTAGGCAATGGTTTCGGTCACAAGATGGAACATACACTATCTTGCAATTTCCATCCATTCATAACAAAAAGCCTCCAAGATCAGGATATCGACGTACAAAAATTAACCCATCTACGTGGGAAATCAGAAATTTAAACACACCAATGGGATCTGACAGACCAAGATGTTTAGTGTCCCACACTTTGGAAATAAACTCAGCATCCTGGTATCGGTGGAAGAACAGCCAACAGAACACAAAATTTGAGAAGAGCGTCCCATATGCCTTGTTGTGCCAAGTCGCAGGTCTAAAGGAATATATTGGAGCCAATCCAGCACTCCTCCAGCAATATGCCTCTAATGCTGTTCGTTCGCATAGCTCCCATCCCTCTCTCACCAGTTCTGACTTTGCAGATGATATACAAGATGAATTTTATGATGCAATCGCTGCCGAGTCATCGTCAGATGATGATACTGATGACGATAAAGGGTCTGATCAGGAGCACAAAGTCAAATTAAAGAATGTTTCTTGGGCCATGTCAACCTTGGCTGTGAAGCGAGGTGCAGCTTCAGATGCAAGCAAAGAATTAGATCCGGATGCAAGTTGTATCACAATTGATGTGAGTGGCATGCACGGTTCGTTGCGCAGAGGTGAAGGTGACAAGGATACAGACTGTTGGACTTGTCCTGGTGGTGAAGGCTTTATGATTAGAGGAAAGAACTATCTGAAAGATAATTCTAAGGTAGTCGGAGGAGATCCTCTTCTCAAGCTCATAGCAGTAGATTGGTTAAAAGTTGACAAAGCTGCAGACAGAATTGCACTGCATCATAAAAATTTGGTTCAGTCGGAAGCTGGGAAAAGTCTACCATTTATCCTTGTATTCAATCTACAGCTGAAATTTTCAGTTGAAATCATGGATATTGTACATGTTCAACTTTCTGTTAGTCAAATCTCTGGTGATGCTCATCAATGTGAGATTGCAATGGCTGAAGAGATCATTGTTCCAGCTAAACCAAACTACAGCTTGGTTTTATATTATGCATCTGACAGACCTGTAAAGAAAGATTCTCTATTGGCAAAGTTTTTGGATGGGGATGACGCGTTTCGTGACACAAGATTCAAACTGATTCCAAGCATAGTTGAGGGATATTGGATGGTCAAGCGAGCTGTCGGAACAAAAGCTTGCCTGCTGGGGAAAGCTGTCACTTGTAAATACTTTAAGCAAGACAATTTTTTTGAGATAGATGTAGATATTGGATCATCTTCTGTAGCTAGAAGTGTCATTGGCCTTGTTCTGGGATATGTCACAAGCCTGGTCGTTGACCTTGCAATTTTGATAGAGGCAAAAGAAGAATCAGAGCTGCCAGAGTACTTACTTGGAACTGTACGATTAAACCGCTTGAAACCTGAATCTGCTGAGCCGTTGGGGGATTGA 2220 0.4288 MEASSSGEASERGVEEKGTFQYFGWVYHVGVNSVGREYCHLRFLLIRGKCVAMYKRDPHQNPDIKPIRQGVIGATLVVEDLGCRKVNNGDLYVVRFYSRQEEGRKGEVSSLLFSQSQYLLRIDLQGNRHKLKRYASGLKKLKKIGQGPETLLRLSSKFFGNSDCFEGETGDVFDIHQWKCVRTMSGIRIFEDVSDHKGALVKSVGVIDAPADSVFEVFLNTERQKRYEWDMLMGDLELVETYDGHYDVVYGTYDPKYLTRWHSKRDFIFSRQWFRSQDGTYTILQFPSIHNKKPPRSGYRRTKINPSTWEIRNLNTPMGSDRPRCLVSHTLEINSASWYRWKNSQQNTKFEKSVPYALLCQVAGLKEYIGANPALLQQYASNAVRSHSSHPSLTSSDFADDIQDEFYDAIAAESSSDDDTDDDKGSDQEHKVKLKNVSWAMSTLAVKRGAASDASKELDPDASCITIDVSGMHGSLRRGEGDKDTDCWTCPGGEGFMIRGKNYLKDNSKVVGGDPLLKLIAVDWLKVDKAADRIALHHKNLVQSEAGKSLPFILVFNLQLKFSVEIMDIVHVQLSVSQISGDAHQCEIAMAEEIIVPAKPNYSLVLYYASDRPVKKDSLLAKFLDGDDAFRDTRFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCKYFKQDNFFEIDVDIGSSSVARSVIGLVLGYVTSLVVDLAILIEAKEESELPEYLLGTVRLNRLKPESAEPLGD 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00732 739 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 488 729 IPR009769 -
Vimu10g00732 739 Pfam START domain 189 314 IPR002913 GO:0008289
Vimu10g00732 739 SUPERFAMILY Bet v1-like 170 338 - -
Vimu10g00732 739 Gene3D - 172 358 IPR023393 -
Vimu10g00732 739 ProSiteProfiles START domain profile. 178 334 IPR002913 GO:0008289
Vimu10g00732 739 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 36 735 IPR045096 -
Vimu10g00732 739 CDD START 177 359 - -
Vimu10g00732 739 MobiDBLite consensus disorder prediction 412 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00732 Vimu-Chr10 6308728 6319839 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00732 - - gmx:100786048 1115.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01147 7 11147371 11164039 Vimu10g00732 10 6308728 6319839 PCT