Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01145 TCCTCAAACTCAATTTCCACGCCGATGTTCTTCCCTCTACCCTCTGATCTGACGAAAAACCGTCCAAAAATGGAGTCTTGTCGTGGATTTAGAATGTGGGCATTCGTTTTGATGTGTTTAATGTTTCAATCGGGAAATGGGTTTTACCTCCCGGGTAGTTACCCTCACAAGTATGGCGTTGCGGATGAGTTGTGGGTGAAGGTGAATTCTCTGACTTCAATTGACACAGAAATGCCGTTTAGTTATTACAGTCTACCTTTCTGTAAGCCTGAAGGTGGTGTTAAGGACAGTGCCGAGAATCTGGGTGAACTCCTTGTGGGGGATCGGATCGAGAACTCGCCCTACAGGTTTAAGATGTACACCAATGAGTCTGAGATATTTTTGTGTCAACTGGAAAAGCTCTCTGATGATCAGTTTAAGATTTTGAAGAAGAGGATTGATGAGATGTATCAGGTTAATTTGTTACTTGATAATTTACCTGCCATTAGGTTTACCAAGAAGGAGGACTACTTGTTGAGGTGGACTGGGTACCCTGTTGGTATCAAGATTCAGGATGTGTATTATCTGTTCAACCATCTGAGGTTTAATGTTCTTGTCCATAAGTACGAGGAGACCAATGTGGCACGTGTTATGGGGACCGGTGATGCGGCTGAATTGATCCCCACGATTGGTAAGGAGGGATCTGACAAGCCTGGTTACATGGTTGTTGGGTTTGAGGTGATACCCTGTAGTATTCTGCACAATGCTGATTCGGTTAAAGGAATGAACATGTATAGCAAATACCCCTCACCTATCAAATGTGATCCCTCCACAGTGGCCATGCCAATCAGGGAGGGGCAGCCGGTTACATTTACATATGAGGTCACCTTTGAGGAGAGTGATATCAAGTGGCCTTCTAGATGGGATGCCTACTTGAAAATGGAGGGTGCCAAAGTTCACTGGTTCTCGATCTTGAATTCGCTTATGGTGATCACTTTTCTTGCTGGTATTGTTCTTGTTATCTTCCTGAGGACTGTTAGGAGGGATCTGACCCGATACGAGGAGCTTGATAAGGAGGCACAGGCACAGATGAACGAGGAGTTATCTGGTTGGAAGCTTGTTGTGGGAGATGTTTTCCGAGCACCAACAAATTCTGCTTTGTTGTGTATAATGGTTGGGGATGGAGTTCAGATTCTGGGGATGGCTGTTGTGACAATTCTTTTTGCTGCACTTGGATTCATGTCACCAGCATCTCGCGGAACACTCATCACAGGTATGCTGTTTTTCTACATGATACTTGGTGTAGCTGCTGGTTATGTTGCAGTTCGGCTATGGAGGACGATTGGCTATGGTGATAAAAAGGGATGGATTTCAGTGGCATGGAAGGCTGCTTGTTTCTTCCCTGGTATTGCCTTTTTTATCCTGACAACTTTAAACTTCCTATTATGGGGAAGCCACAGCACAGGAGCCATTCCATTTTCACTGTTTGTTATTCTGATTTTGCTCTGGTTCTGCATTTCTGTTCCCCTTACTCTTATCGGTGGCCTCTTTGGAGCAAGGGCACCTCACGCTGAGTATCCAGTTCGAACCAATCAAATCCCTCGAGAAATTCCCAAGCAGAAATATCCATCATGGCTCATGGTTCTCGGCGCCGGCACCCTTCCATTCGGTACCTTGTTCATCGAGCTCTTCTTCATCATGTCCAGTATATGGATGGGTCGTGTTTACTATGTGTTTGGATTTCTCTTAATTGTCTTGATCCTTCTTGTGGTGGTGTGTGCTGAGGTATCTCTAGTTCTAACCTACATGCACCTGTGTGTGGAGGACTGGAGATGGTGGTGGAAATCATTCTTTGCCTCTGGTTCTGTTGCCATATACATCTTTTTGTACTCCATAAACTACCTCGTATTTGACCTCAAGAATCTAAACGGGCCTGTTTCTGCAACTCTTTACTTGGGATATTCCTTATTCATGGTTCTTGCAATCATGTTGGCTACAGGCACAGTTGGATTCCTTTCCTCGTTCTGGTTCGTCTATTACTTGTTCTCTTCAGTCAAGTTGGATTGA 2046 0.4467 SSNSISTPMFFPLPSDLTKNRPKMESCRGFRMWAFVLMCLMFQSGNGFYLPGSYPHKYGVADELWVKVNSLTSIDTEMPFSYYSLPFCKPEGGVKDSAENLGELLVGDRIENSPYRFKMYTNESEIFLCQLEKLSDDQFKILKKRIDEMYQVNLLLDNLPAIRFTKKEDYLLRWTGYPVGIKIQDVYYLFNHLRFNVLVHKYEETNVARVMGTGDAAELIPTIGKEGSDKPGYMVVGFEVIPCSILHNADSVKGMNMYSKYPSPIKCDPSTVAMPIREGQPVTFTYEVTFEESDIKWPSRWDAYLKMEGAKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPTNSALLCIMVGDGVQILGMAVVTILFAALGFMSPASRGTLITGMLFFYMILGVAAGYVAVRLWRTIGYGDKKGWISVAWKAACFFPGIAFFILTTLNFLLWGSHSTGAIPFSLFVILILLWFCISVPLTLIGGLFGARAPHAEYPVRTNQIPREIPKQKYPSWLMVLGAGTLPFGTLFIELFFIMSSIWMGRVYYVFGFLLIVLILLVVVCAEVSLVLTYMHLCVEDWRWWWKSFFASGSVAIYIFLYSINYLVFDLKNLNGPVSATLYLGYSLFMVLAIMLATGTVGFLSSFWFVYYLFSSVKLD 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01145 681 Pfam Endomembrane protein 70 79 633 IPR004240 GO:0016020
Vimu7g01145 681 Coils Coil 336 356 - -
Vimu7g01145 681 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 47 681 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01145 Vimu-Chr7 11120699 11122946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01145 24 681 Miscellaneous Gene Families AT5G35160 84.219 0.0 1135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01145 K17086 - gmx:100802084 1292.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01145 7 11120699 11122946 Vimu7g01145 7 11120699 11122946 ECH
Vimu7g01145 7 11120699 11122946 Vimu10g00723 10 6264242 6266224 PCT