Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00723 ATGGAATATTTTGCGCAATTTGGGTTGTGGGTGACCTTGATCTTGTTCTTGACATTTCAAATTCAACCCAATTATGGGTTCTACCTTCCTGGTAGTTATCCCCACAAGTATGTTGTCACGGATGAGTTGTGGGTGAAAGTGAATTCGCTTACTTCCATTGACACAGAGATGCCCTTTAGCTATTACAGTTTGCCCTTTTGCCAGCCTGAGGGAGGTATCAAGGACAGTGCTGAGAATCTTGGGGAACTCCTCATGGGTGACAGAATAGAGAACTCTCCCTACAGGTTTAAGATGCACACAAATGAATCTGAGATTTACTTGTGCCGGGTGGAGTCATTGTCCGGGGATCAGTTCAAGATCTTGAAGGAGAGGATTGACCAGATGTATCAGGTTAACTTGATTCTTGATAATTTACCTGCTATCAGGTTCACACAGAAAGAAGGGTACTTCATGAGATGGACGGGGTACCCTGTTGGTGTTAAGATCGAGGATGCTTATTATGTGTTTAACCATCTCAAGTTCAATGTTCTTGTTCACAAGTATGAGGAGACCAATGTGGCTCGAGTAATGGGGACCGGCGATGGCGCAGAAATGATCCCTGTTGGCAAGGAGGACTCTTCTGAGAAGCCTGGATACATGGTTGTGGGGTTCGAGGTGATTCCTTGCAGTATCATGCATAATGCTGATATGGCTAAAAACTTGAAGATGTATGACAAGTATCCCTCGTCTATCCGATGCGATCCGGCCACTGTGGCAATGCCTATCAAAGAGGGTCAGCCTCTTGTTTTCACTTACGAGGTGACCTTTGAGGAGAGTGACATCAAGTGGCCATCTAGATGGGATGCCTACTTAAAGATGGAGGGAGCTAAAGTGCATTGGTTCTCTATCCTCAATTCGCTTATGGTGATCACTTTTCTTGCTGGTATTGTTCTTGTGATCTTCCTGAGAACTGTTAGGAGAGATCTGACCCGTTATGAGGAGCTGGACAAGGAGGCTCAAGCACAGATGAATGAAGAGTTATCTGGTTGGAAGCTTGTGGTGGGAGATGTTTTCCGTGCTCCATCGAATCCTGCTTTGTTGTGTGTGATGGTTGGGGATGGGGTTCAGATTCTTGGTATGTCTGTTGTGACAATTTTGTTTGCTGCACTAGGATTCATGTCACCAGCATCTCGCGGAACGCTGATCACAGGTATGCTGTTTTTCTACATGATACTTGGTATTGCTGCTGGCTATGTCTCAGTTCGGTTGTGGAGGACAATTGCCTTTGGAGATCAGAAGGGCTGGGTTTCGATCGCATGGAAGGCCGCTTGTTTCTTCCCAGGAATTTCCTTCTTGATCCTCACAACCTTGAACTTCCTTTTGTGGGGAAGCCACAGCACTGGAGCCATTCCATTTTCACTCTTTGTGATACTAATCTTGCTTTGGTTCTGCATATCTGTACCCCTTACCCTTGTTGGTGGCTACTTCGGAGCCAAGGCACCCCACATTGAGTATCCAGTCCGAACCAACCAAATTCCTCGTGAAATTCCCCAGCAAAAGTACCCATCATGGCTGTTAGTTCTTGGTGCTGGCACCCTTCCATTTGGCACCTTGTTCATTGAGCTCTTTTTTATCATGTCTAGCATTTGGATGGGTCGAGTTTACTATGTCTTCGGGTTCCTCTTCGTTGTTCTGATCCTTCTGGTGCTGGTTTGTGCTGAGGTATCTTTAGTTCTTACTTACATGCACCTGTGTGTGGAGGATTGGAAATGGTGGTGGAAATCGTTCTTTGCCTCCGGTTCTGTTGCCTTGTACATCTTTCTGTACTCCATTAACTATCTTGTGTTTGATCTCAAGAGTTTGAGTGGTCCTGTGTCTGCAACTCTGTACTTGGGATACTCACTCTTCATGGTTCTAGCAATCATGCTCTCTACAGGAACTATTGGGTTCCTCTCTTCATTCTGGTTCGTGCATTACTTGTTCTCTTCAGTCAAGTTGGATTGA 1983 0.4554 MEYFAQFGLWVTLILFLTFQIQPNYGFYLPGSYPHKYVVTDELWVKVNSLTSIDTEMPFSYYSLPFCQPEGGIKDSAENLGELLMGDRIENSPYRFKMHTNESEIYLCRVESLSGDQFKILKERIDQMYQVNLILDNLPAIRFTQKEGYFMRWTGYPVGVKIEDAYYVFNHLKFNVLVHKYEETNVARVMGTGDGAEMIPVGKEDSSEKPGYMVVGFEVIPCSIMHNADMAKNLKMYDKYPSSIRCDPATVAMPIKEGQPLVFTYEVTFEESDIKWPSRWDAYLKMEGAKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPSNPALLCVMVGDGVQILGMSVVTILFAALGFMSPASRGTLITGMLFFYMILGIAAGYVSVRLWRTIAFGDQKGWVSIAWKAACFFPGISFLILTTLNFLLWGSHSTGAIPFSLFVILILLWFCISVPLTLVGGYFGAKAPHIEYPVRTNQIPREIPQQKYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGRVYYVFGFLFVVLILLVLVCAEVSLVLTYMHLCVEDWKWWWKSFFASGSVALYIFLYSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLSTGTIGFLSSFWFVHYLFSSVKLD 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00723 660 Coils Coil 315 335 - -
Vimu10g00723 660 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 26 660 IPR004240 GO:0016020
Vimu10g00723 660 Pfam Endomembrane protein 70 58 613 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00723 Vimu-Chr10 6264242 6266224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00723 1 660 Miscellaneous Gene Families AT5G35160 83.837 0.0 1127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00723 K17086 - gmx:100819368 1271.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00723 10 6264242 6266224 Vimu10g00723 10 6264242 6266224 ECH
Vimu7g01145 7 11120699 11122946 Vimu10g00723 10 6264242 6266224 PCT