Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01078 ATGTCAGTAAAGATCGTGGTGCAGACTTTTTTGTGGTTTCCACGGGAACAAGCTGTAGTGCCTAGGTTGTCAAGGACACTTTGCTTTTTTCATGGGGCGCAAGCAATTTGGTTCCCAAGTCAAACCCGTAGTGTCGCATTCAAGCTTTTGTTTTCCCTCAATCCAACTGGAGTTCTGCTCGTACTCGAACCTCTCTTGAACCCTAACTTGAAGTCTCCTTTGTGGATCGCAGTGAAAGCTTCCTCTATCGAACACAGTGAAGGTTGGTTTGTTCCCATTGGAAGAGATAAGGTCGAGGTCCAATTTCCTTTTGTACCTGTTGGTGCAGTTGTGCAGCCTCCATTACTGCATCAACGTTTAGCCACGCAACCACCATTTACATTCTCATCCATCGTTACCTTGCATCTCAGATCATCTCATCTCATCACACTACTCTTCCATTCATCATCGTATCATATCATACCTCAACCTTCCTTCCAGAGGCAGATGAACAGTACTCAGACTAAATGCGTCTTCAAGCGCAAACCCAAAGAAACTGATGAAACCTTCTCTTTTACACAGTCCAAACAGACCATGAAGAAGAACCTCTGCGACCGTCACAGACCAAAACGCTACCCTCTCCTGTCGTTTTGGGAGCTGCCTGACTACATGAAAGACAACGAATACATTCTGCGTTATTACAGGGCCAATTGGCCCTTCAAACAAGCTCTCTTCAGCCTCTTTCGCTGGCACAACGAGACCATAAATGTTTGGACCCATTTCATTGGGTTTTTACTCTTTCTTGGGTTGACTCTCGCCAATTTGATGAAGCCTCGTGTGGTGGATCTCTTGCAACTCCTAACCAGGTCTTTTTCTTCAAATGCGGAAAAAAATGTCTCTCATAACATCAAAGATTTGTTTCTGGGTACAACGATACTGTTTGATTTAAATAATGAAATGCCTTTGACAATCGAACTTCAATCGACAGCATTGGTTATAGCAAGGTGGCCATTCTTTGTTTTCCTAGGTGGTTCAATGTTCTGCCTCTTCTCTAGCAGCATGTGCCACCTCTTCTGTTGCCACTCCCACAACTTGAACATGTTCCTGTGGCGACTGGACTATGTAGGAATAGTTGTGATGATCATCACCTCCTTTTTCCCTCAAATTTACTACGTTTTCCTTTGTGAGCCTCACTGGCAAATCATGTATCTTGCCGGGATCACAGCCATGGGAGTGTTCACCATCGCAACAATGCTCTCCCCAACACTTTCCACCAGCAAATACCGTTCATTTCGTGCCATGTTGTTCTGCTCAATGGGACTTTTCGGCATTGTGCCTGCAATCCATGCATGTTTTGTGAATTGGACCAATCCCAGACGCAATATTACCTTAGCATATGAAAGTGGCATGGCATTATCTTACTTGACAGGGACCTTATTCTATGTGACAAGAATACCCGAAAGATGGAAGCCAGGGTGGTTCGATTTGGCAGGTCACAGCCACCAAATTTTTCATGCTCTTGTGGTGGTTGGAGCATTGTCACATTATGTAGCCACTCTTCAAATGCTGGAGTGGCGTGACTCTTTTGGGTGTGACACGCTTCCATGA 1587 0.4486 MSVKIVVQTFLWFPREQAVVPRLSRTLCFFHGAQAIWFPSQTRSVAFKLLFSLNPTGVLLVLEPLLNPNLKSPLWIAVKASSIEHSEGWFVPIGRDKVEVQFPFVPVGAVVQPPLLHQRLATQPPFTFSSIVTLHLRSSHLITLLFHSSSYHIIPQPSFQRQMNSTQTKCVFKRKPKETDETFSFTQSKQTMKKNLCDRHRPKRYPLLSFWELPDYMKDNEYILRYYRANWPFKQALFSLFRWHNETINVWTHFIGFLLFLGLTLANLMKPRVVDLLQLLTRSFSSNAEKNVSHNIKDLFLGTTILFDLNNEMPLTIELQSTALVIARWPFFVFLGGSMFCLFSSSMCHLFCCHSHNLNMFLWRLDYVGIVVMIITSFFPQIYYVFLCEPHWQIMYLAGITAMGVFTIATMLSPTLSTSKYRSFRAMLFCSMGLFGIVPAIHACFVNWTNPRRNITLAYESGMALSYLTGTLFYVTRIPERWKPGWFDLAGHSHQIFHALVVVGALSHYVATLQMLEWRDSFGCDTLP 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01078 528 PANTHER ADIPOR/PROGESTIN RECEPTOR-RELATED 186 520 IPR004254 GO:0016020
Vimu7g01078 528 Pfam Haemolysin-III related 241 509 IPR004254 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01078 Vimu-Chr7 10630801 10648633 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01078 K07297 - gmx:100816825 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01078 7 10630801 10648633 Vimu7g01078 7 10630801 10648633 ECH
Vimu7g01078 7 10630801 10648633 Vimu10g00928 10 8341479 8347905 PCT