Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01022 ATGAAATTCGGAAAGAGTCTCAGCAGCCAGATCGAGAAAACCCTGCCGGAGTGGCGCGACAAGTTCCTCTCCTACAAGGAGCTCAAGAAGAAGCTTAAACAATTTGACCCTCCTGCTGCCGCCGATGACCGCCCCGGAAAACGCCACAAGTCTGATTCTGCACCCACTGCCGCCGACATGTCCAAGGAGGAGACCGACTTCCGTAACTTGCTCGAGAGTGAACTCGACAAATTCAACACCTTCTTCGTTGAGAAGGAGGAAGAGTACATTATCAGACTCAAGGAGTTTGACATTATTATTGGCTTTGGAACAAATTTTGATATTTTTCTCGGAATTCTGTTAGCATTTGGTTATGTTATTGAGTTACAAGATAGGGTGGTCAAAGTTAAGGATTATAGTGAAGAGATGATGAAAATCCGCAAGGAAATTGTGGATTTCCATGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTGAACTATACAGGGCTAGTGAAAATACTGAAGAAGTATGACAAGAGAACTGGTGCTCTCATCCGCTTGCCCTTCATTCAGAAGGTCTTGCAACAACCTTTCTTTACCACTGACTTGCTCTACAAGCTTGTAAAGGAGTGTGAAACAATGTTGGACCGTCTTTTCCCTGAGAATGATCCTCCTCCAGTTACTGGTGAGACAACTCCCCAAGCTGAAGGTTATGATCCATCAACTTCAACCACTACCAAGAGTGATGGTGGTTTGCTGATTCCCAAGGAATTAGCTGAGATCGAGTACATGGAGAGTCTATATATGAAGAGTACAGTATCAGCTTTGCATGTTTTGCAGGAAATTAGAAGTGGAAGCTCAACTGTTAGCATGTTTTCATTGCCACCGTTGAAGATAAGTGGTTCAGAAGAAACATGGAAGAAAATTCCGGTTCTTGAACAAGCAGCCAAGTAA 936 0.4402 MKFGKSLSSQIEKTLPEWRDKFLSYKELKKKLKQFDPPAAADDRPGKRHKSDSAPTAADMSKEETDFRNLLESELDKFNTFFVEKEEEYIIRLKEFDIIIGFGTNFDIFLGILLAFGYVIELQDRVVKVKDYSEEMMKIRKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKECETMLDRLFPENDPPPVTGETTPQAEGYDPSTSTTTKSDGGLLIPKELAEIEYMESLYMKSTVSALHVLQEIRSGSSTVSMFSLPPLKISGSEETWKKIPVLEQAAK 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01022 311 CDD SPX_AtSPX1_like 2 174 - -
Vimu7g01022 311 ProSiteProfiles SPX domain profile. 1 185 IPR004331 -
Vimu7g01022 311 MobiDBLite consensus disorder prediction 228 243 - -
Vimu7g01022 311 Pfam SPX domain 1 35 IPR004331 -
Vimu7g01022 311 Pfam SPX domain 134 187 IPR004331 -
Vimu7g01022 311 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 297 IPR031142 GO:0016036
Vimu7g01022 311 MobiDBLite consensus disorder prediction 35 64 - -
Vimu7g01022 311 MobiDBLite consensus disorder prediction 213 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01022 Vimu-Chr7 9947748 9950003 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01022 - - gmx:100787780 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01022 7 9947748 9950003 Vimu7g01022 7 9947748 9950003 ECH
Vimu7g01022 7 9947748 9950003 Vimu10g00896 10 7989613 7992095 PCT