Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00896 AACCAGATCGAGAAAACACTACCTCAATGGCGCGACAAGTTTCTCTCCTACAAGGAACTGAAGAAGAAGTTGAAACTCGTGGAAGCCGCCCCCAAATCCTCGGAGGAACGCCCGGCGAAACGCGCAAGGCTCGATGCGGACATGTCTGTGGAGGAAATCGACTTCAGGAACTCGCTCGAACAAGAACTCCACAAATTCAACACCTTCTTTGAGGAGAAAGAGGAAGAGTGCATCATTAAATTGAAGTATGACAAGAGAACTGGTGCTCTCATTCGCTTGCCTTTCATTCAGAAGGTCTTGCAACAGCCTTTCTTCACCACTGACCTTCTCTACAAACTTGTGAAGGAGTGTGAAACAATGCTGGATCAGCTTTTCCCAGTGAATGATCCTTCGATTTCCGGTGAGGCAACTCCCCAAGCTGAGGGGTGTGAGGCTTCAACTTCAACCAGCACAAAGAATAATGAGGATCTGCTGATGCCTAAAGAGTTAGCAGCCAACCAGCACATTGACGAGAGCCTCTACATGAAGAGTACCATTACAGCTTTACATGTTTTGCAGGAAATTAGAAAGGGAAGCTCAACAGTAAGCATGTTTTCTTTGCCACCGCTGCAGATGAGTGGTTTGGAAGAAACATGGAACAAAATCCCAATTCTGGAACAGACAGCCAAGTAA 672 0.4658 NQIEKTLPQWRDKFLSYKELKKKLKLVEAAPKSSEERPAKRARLDADMSVEEIDFRNSLEQELHKFNTFFEEKEEECIIKLKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKECETMLDQLFPVNDPSISGEATPQAEGCEASTSTSTKNNEDLLMPKELAANQHIDESLYMKSTITALHVLQEIRKGSSTVSMFSLPPLQMSGLEETWNKIPILEQTAK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00896 223 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 82 IPR031142 GO:0016036
Vimu10g00896 223 ProSiteProfiles SPX domain profile. 1 223 IPR004331 -
Vimu10g00896 223 MobiDBLite consensus disorder prediction 131 152 - -
Vimu10g00896 223 Coils Coil 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00896 Vimu-Chr10 7989613 7992095 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00896 - - gmx:100790400 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00896 10 7989613 7992095 Vimu10g00896 10 7989613 7992095 ECH
Vimu7g01022 7 9947748 9950003 Vimu10g00896 10 7989613 7992095 PCT