Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01018 ATGGAGACCAACAAACAACAGAGGAAGAAATGGTTCCTTTCACTTGTATTGTCTCTACTCTTGTTAACCTTACTCATACTCTTTTCCATATTCGTCTCCACCGATTCTTCCTCTTTGCCCTCCCTATATCGTACACGTGGCAGAGTGGAAGAGCCTCGTTTCGTCGAGTCAAAGCTCAGGGTGTCTTCCACGTCATCCAGCGAATCCGTTCCCAGGATCGCCTACCTGATCTCGGGGTCAGTGGGTGATGGCGAGACTCTGAAAAGGACCCTCAAGGCCCTTTATCATCCCAGGAATCAGTACGCTGTGCACTTGGACCTCGAGGCTTCCACGCAGGAAAGATTGGAGCTTGCCAACTTCGTCAAGAACGAGCCTCTCTTTGCCAAATTGGGCAATGTTAGGATGGTTGTTAAGGCTAACTTGGTCACCTACAGGGGACCTACTATGGTCACTAATACCCTTCACGCTGCGGCCATTTTGTTCAAGGAAGGTGGACTCTGGGATTGGTTCATCAATCTTAGCGCTTCTGATTACCCCTTGGTAACCCAAGATGCTGACAGGTTTGTTCCTCTCTCTCTTCTTGTGGCCTGGGGTGGTGGGGGAGGAAGAATGCCGGATCTGTTGCATACGCTGTCATCAACTCCGAGACACCTTAACTTTATTGAGCACACCAGTGACATTGGCTGGAAAGAAGATCAGAGAGCCAAGCCTGTTATAATTGATCCAGCACTTTATAGTGTCAATAAATCTGATTTATTTTGGGTGACAGAGAAAAGAAATGTTCCCACAGCATATAAGCTGTTTACAGGTTCTGCTTGGATGATGCTCTCTCGCCAATTTGTTGAGTATTTGTTATGGGGATGGGATAACTTGCCTAGAATAGTCTTGATGTATTATGCCAACTTTCTATCCTCCCCCGAAGGTTATTTTCACACAGTCATCTGCAATGCTGATGAGTTCCGGAACACTACTGTAAATCATGACCTCCACTTCATATCATGGGATAACCCTCCAAAACAACATCCACACTTCCTAACAATCAATAACTACGAGGAAATGGTAGAGAGCAACGCTCCATTTGCTCGGAAATTTGGCTGCAACGAACAACTCTTGGATAAGATTGATACTGAACTCCTGGGACGAAACGAACATGGTTATGTGCCTGGCAAGTGGTTTGACCGGACAAATTCAAACACCACCAAGCCATATTCTGCCATAAAAAATATCACCGAACTTAAGCCTGGCCCTGGAGCAGAAAGGCTCAAACGTCTTATCAATGGTTTATTGTCAGCAGAAGATTTTCACACTAAGCAGTGTTCTTGA 1323 0.458 METNKQQRKKWFLSLVLSLLLLTLLILFSIFVSTDSSSLPSLYRTRGRVEEPRFVESKLRVSSTSSSESVPRIAYLISGSVGDGETLKRTLKALYHPRNQYAVHLDLEASTQERLELANFVKNEPLFAKLGNVRMVVKANLVTYRGPTMVTNTLHAAAILFKEGGLWDWFINLSASDYPLVTQDADRFVPLSLLVAWGGGGGRMPDLLHTLSSTPRHLNFIEHTSDIGWKEDQRAKPVIIDPALYSVNKSDLFWVTEKRNVPTAYKLFTGSAWMMLSRQFVEYLLWGWDNLPRIVLMYYANFLSSPEGYFHTVICNADEFRNTTVNHDLHFISWDNPPKQHPHFLTINNYEEMVESNAPFARKFGCNEQLLDKIDTELLGRNEHGYVPGKWFDRTNSNTTKPYSAIKNITELKPGPGAERLKRLINGLLSAEDFHTKQCS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01018 440 Pfam Core-2/I-Branching enzyme 206 353 IPR003406 GO:0016020|GO:0016757
Vimu7g01018 440 Pfam Core-2/I-Branching enzyme 73 184 IPR003406 GO:0016020|GO:0016757
Vimu7g01018 440 PANTHER GLYCOSYLTRANSFERASE 8 439 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01018 Vimu-Chr7 9921436 9924325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01018 1 439 Glycosyltransferase AT5G15050 58.667 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01018 K20891 - gmx:100789736 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01018 7 9921436 9924325 Vimu7g01018 7 9921436 9924325 ECH
Vimu10g00886 10 7891694 7892643 Vimu7g01018 7 9921436 9924325 PCT