Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00995 ATGGAACACAAATTTATTAATTTAGGACCTCAATTGAACATATTGATCAGGAAAATGAGCTGGTCTGGAGGAGATTGGATGTGTGGTGTTTGCCAGCACATAAATTTCAAAAAGAGGGAAGCATGCCAGAGCTGTGGATACCCCAAGTATGGGGAACCTGACCCTTCAACCAACAACAGATACAACAGGACTGAAGCTTTGGCAGGGGACTGGTTCTGCAACTGTGGAGGTCACAACTATGCCAGTAGATCAAGGTGCTATAAATGTGGTGCACTAAAAGATCATTACTTTTCAGTATATGGCACCAACTCTGGAGAATATGGATCTGACACTCTCCCCCCAGGATGGAAGACTGGAGACTGGCTTTGCCCAAGAATAGGCTGTGGAGGGCATAATTATGCTAGCAGAGAAGAATGCTTTAAATGCCAAATGCCTAGGGATTTTGGTGAGGGACTCTAA 459 0.4444 MEHKFINLGPQLNILIRKMSWSGGDWMCGVCQHINFKKREACQSCGYPKYGEPDPSTNNRYNRTEALAGDWFCNCGGHNYASRSRCYKCGALKDHYFSVYGTNSGEYGSDTLPPGWKTGDWLCPRIGCGGHNYASREECFKCQMPRDFGEGL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00995 152 SMART zf_4 24 48 IPR001876 -
Vimu7g00995 152 SMART zf_4 69 92 IPR001876 -
Vimu7g00995 152 SMART zf_4 119 145 IPR001876 -
Vimu7g00995 152 SUPERFAMILY Ran binding protein zinc finger-like 112 148 IPR036443 -
Vimu7g00995 152 ProSiteProfiles Zinc finger RanBP2 type profile. 22 51 IPR001876 -
Vimu7g00995 152 PANTHER ZINC FINGER PROTEIN 62 149 - -
Vimu7g00995 152 SUPERFAMILY Ran binding protein zinc finger-like 19 51 IPR036443 -
Vimu7g00995 152 ProSitePatterns Zinc finger RanBP2-type signature. 26 45 IPR001876 -
Vimu7g00995 152 Gene3D - 60 95 - -
Vimu7g00995 152 Gene3D - 114 148 - -
Vimu7g00995 152 Gene3D - 16 53 - -
Vimu7g00995 152 SUPERFAMILY Ran binding protein zinc finger-like 65 95 IPR036443 -
Vimu7g00995 152 ProSitePatterns Zinc finger RanBP2-type signature. 121 142 IPR001876 -
Vimu7g00995 152 ProSiteProfiles Zinc finger RanBP2 type profile. 117 148 IPR001876 -
Vimu7g00995 152 Pfam Zn-finger in Ran binding protein and others 117 146 IPR001876 -
Vimu7g00995 152 Pfam Zn-finger in Ran binding protein and others 68 93 IPR001876 -
Vimu7g00995 152 Pfam Zn-finger in Ran binding protein and others 24 50 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00995 Vimu-Chr7 9778427 9779179 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00995 - - pvu:PHAVU_003G162400g 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00995 7 9778427 9779179 Vimu10g00873 10 7767000 7767992 PCT