Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00885 TTGAATTTGAATTTATGCTGTTGGGCTGCCGCCGGTTCTGGATTGACTGCTGAATCGGTGAAAGATGCGACGACGGGCTGCCGATTTTCGGCGCCCGGCTCGACGGAGGTTTTCATATTGGATCTGGCTTCTCCTCGCCTTCTCCTTTATAATTGCTCTCCTTCTCTTCCTTCTCCAACACAACCACCACCACCGAGATCCGCATCATTATCCTTTGCCGGTTGCTTTGCTTTGCAGGAGAGAAATGAAAGAGTTGAACAATTTGCTAAGGAGAGTTTGAATTTTACTCAAGAGATTTTAAGTGTTACATCATTTTCACGACAGTTAGCAGAACAAATGATTCTGGCCAAAGCTTATGTGGTTATTGCCAAAGAGCATAACAATCTTCACCTTGCCTGGCAGCTTAGCTCAAAGATCAGGAATTGCCAACTTTTGCTTTCAAAAGCGGCCATCACTGGTGAGCCCATCACGTTGGAGGAAGCAGAGCCAATTATTAGAAGCCTTTCTCTTCTAATGTTTAAGGCACAAGATATACATTATGACATTGCAACCACAATAGTGACCATGAGATCACATATTCAAGCTCTAGAAGAACGAGCCAATGCTGCAATAGTTCAAAGCACCGTGTTTGGTCAAATAGCAGCTGAAGCAGTACCCAAAAGTCTTCACTGCCTAAATGTAAAACTCATGTCTGATTGGCTAAGGATGCCTTCCCTGCAGGAACTCTCAGATGAGAGGAAAAACTCCCCACGGCTTGTGGACAACAATCTATATCATTTCTGCATATTTTCAGATAATGTACTGGCAACATCTGTAGTTGTAAACTCAACTGTCTCCAATGCTGACCATCCAAAGCAATTGGTCTTTCACATTGTCACTACTGGAGTCAGTTATGGGGTAATGCTAGCGTGGTTCCTACGCAATGACTTTAAAGGAGCCACCATAGAGATACAGAACATTGAGGAGTTTCATTGGTTGAATGCATCTTATTCTCCACTTGTCAAGCAGCTCCTCAATCCTGATTCAAGAACCTTCTATTTTGGAGCATATCAAGATTTAAATGTTGAACCCAAAATGCGGAACCCCAAGTATCTTTCTTTATTGAATCATCTTCAGTTTTACATCCCTGAGATTTATCCGCAACTTGAGAAGGTTGTCTTCCTGGATGATGACCTTGTAGTCCAGAAGGATCTGACCCCACTTTTCTCACTGGATTTGCATGGGAATGTGAATGGTGCTGTGGAAACTTGTCTTGAAGCATTTCATCGATACTACAAGTATCTCAATTTCTCAAATTCAGTCATTAGCTCGAGATTTGATCCACAGGCATGTGCATGGGCATTTGGTATGAACATTTTTGACTTGGTTGCATGGAGGAAGGCAAATGTGACCGGAAGATATCACTATTGGCAAGAGCAGAATGCTGATGGGACACTCTGGAAGCTGGGGATACTTCCTCCTGCTCTTCTGTGTTTTTATGGTTTGACAGAGCCACTTGACAGAAGATGGCATGTTTTAGGATTGGGTTATGATCTAAATATTGACAATCGACTCATCGAAAGTGCGGCAGTCATTCACTTCAACGGGAACATGAAGCCGTGGTTGAAGTTAGCCATAGGCAGGTATAAGCCACTATGGGACAAGTACATAAATCAAAGTCACCCTCATCTTCAAGATTGTGTCACAAGTTGA 1692 0.4291 MNLNLCCWAAAGSGLTAESVKDATTGCRFSAPGSTEVFILDLASPRLLLYNCSPSLPSPTQPPPPRSASLSFAGCFALQERNERVEQFAKESLNFTQEILSVTSFSRQLAEQMILAKAYVVIAKEHNNLHLAWQLSSKIRNCQLLLSKAAITGEPITLEEAEPIIRSLSLLMFKAQDIHYDIATTIVTMRSHIQALEERANAAIVQSTVFGQIAAEAVPKSLHCLNVKLMSDWLRMPSLQELSDERKNSPRLVDNNLYHFCIFSDNVLATSVVVNSTVSNADHPKQLVFHIVTTGVSYGVMLAWFLRNDFKGATIEIQNIEEFHWLNASYSPLVKQLLNPDSRTFYFGAYQDLNVEPKMRNPKYLSLLNHLQFYIPEIYPQLEKVVFLDDDLVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSVISSRFDPQACAWAFGMNIFDLVAWRKANVTGRYHYWQEQNADGTLWKLGILPPALLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWDKYINQSHPHLQDCVTS 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00885 563 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 83 561 IPR029993 GO:0047262
Vimu7g00885 563 Pfam Glycosyl transferase family 8 262 537 IPR002495 GO:0016757
Vimu7g00885 563 SUPERFAMILY Nucleotide-diphospho-sugar transferases 258 561 IPR029044 -
Vimu7g00885 563 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 260 560 IPR029044 -
Vimu7g00885 563 FunFam Hexosyltransferase 260 556 - -
Vimu7g00885 563 CDD GT8_like_1 258 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00885 Vimu-Chr7 8663585 8666873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00885 77 560 Glycosyltransferase AT2G20810 56.967 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00885 K13648 - gmx:100805886 930.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00885 7 8663585 8666873 Vimu7g00885 7 8663585 8666873 ECH
Vimu7g00885 7 8663585 8666873 Vimu10g00796 10 7010276 7013353 PCT