Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00853 GCAACTTGGTGCGTTTGTAAGGATGGAGGCGACGCGATCCTGCAGAAAACATTGGACTATGCTTGTGGAGCTGGCGCTGACTGTAACCCTCTCCATCAAAACGGGCCTTGCTACCAGCCCAACACCGTCAGGGCTCACTGCAACTACGCCGTGAATAGCTACTTCCAAAAGAAGGGTCAGGCTCAAGGGTCCTGTGAGTTTGCAGGAACAGCCACTGTTACTGCTACTGACCCCAGAACTGGTACAACTCCTGTCACAACTACACCAACCATGGGCACCACTCCCACCACTGGAACCCCATCAACCGGTACCGGCACCGGCACTGGAACCACCACCGGTACTACTCCATACAGCACAACACCGGGAGTATTAGGAGGCATTGGCAGTGGCATGGGACCTTCAGGATCTGGCATGAATGATGAGAGTCACGGTGGCCTTAGACTAGTGCACTCTAGCTTCTTCTTCATCTCTCTCTTGTCTTCCTTCATGATCTTCTGCTGGGGCTGA 507 0.5385 ATWCVCKDGGDAILQKTLDYACGAGADCNPLHQNGPCYQPNTVRAHCNYAVNSYFQKKGQAQGSCEFAGTATVTATDPRTGTTPVTTTPTMGTTPTTGTPSTGTGTGTGTTTGTTPYSTTPGVLGGIGSGMGPSGSGMNDESHGGLRLVHSSFFFISLLSSFMIFCWG 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00853 168 SMART X8_cls 2 84 IPR012946 -
Vimu7g00853 168 FunFam Glucan endo-1,3-beta-glucosidase 4 1 88 - -
Vimu7g00853 168 Gene3D - 1 97 - -
Vimu7g00853 168 PANTHER BETA-1,3 GLUCANASE 1 98 IPR044788 -
Vimu7g00853 168 Pfam X8 domain 2 72 IPR012946 -
Vimu7g00853 168 MobiDBLite consensus disorder prediction 76 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00853 Vimu-Chr7 8385686 8388217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00853 2 81 Glycoside Hydrolase AT2G05790 52.439 5.76e-22 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00853 - - gmx:100500078 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00853 7 8385686 8388217 Vimu10g00980 10 8921933 8922577 ECH
Vimu7g00853 7 8385686 8388217 Vimu7g00853 7 8385686 8388217 ECH