Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00789 ATGGTTGGCGACAAGACGAAGAAGTTGAAAATCGCTGAGAATTTGGAAGATACCATCGACGAAAAACTCATCCTCTCCATTGAGAAGTTGCAAGAGGTCCAAGACGAACTCGACAAGATCAATGAGGAGGCGAGTGATAAGGTCCTCGAAGTAGAGCAGAAGTTTAACGAGATAAGGAAGCCAGTTTACGATAAGCGAAATGAGATCATCGTCAAATCTATTCCTGATTTCTGGTTTACTGCTTTTATGAGTCACCCTGCTCTTTGTGAACTTCTGAATTTAGAGGATCAAAAGATATTTAAGTATTTGGGTTCTCTCGAGGTTGAAGATAATAAAGATGTCAAATCTGGGTACTCAATCACCTTTAATTTCAATCCCAATCCCTATTTTGAGAATACAAAGCTTACGAAGACTTTTACCTTCTTTGAAGAAGGATCAACAAAGATAACTGCTACCCCCATTAAATGGAAAGAGGGCAAGGGATTACCCAATGGAGTCAATCTGGACAAGAATGGGAAGCGGGGTCGTATTGATATCAGTTTCTTTACTTGGTTTAGTGACTCTGAACAGAAAGACGATGCGGATGAAATTCATGATGAGGTTGCAGAATTGATCAAAGATGATTTATGGCCAAATCCACTTACTTATTTCAACAATGAGTTTGACGAAGAGGATTTTGATGATGAAGGTGATGATGAGGTAATTGAAGTTCTAATTTACTTTGAAAAAGAATATATGATTGGCAAATATGATTGGAGTATTGTTGTTTATGTTTTATGGAATCTTGCTGGATCCATGCTTTAA 804 0.3781 MVGDKTKKLKIAENLEDTIDEKLILSIEKLQEVQDELDKINEEASDKVLEVEQKFNEIRKPVYDKRNEIIVKSIPDFWFTAFMSHPALCELLNLEDQKIFKYLGSLEVEDNKDVKSGYSITFNFNPNPYFENTKLTKTFTFFEEGSTKITATPIKWKEGKGLPNGVNLDKNGKRGRIDISFFTWFSDSEQKDDADEIHDEVAELIKDDLWPNPLTYFNNEFDEEDFDDEGDDEVIEVLIYFEKEYMIGKYDWSIVVYVLWNLAGSML 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00789 267 Pfam Nucleosome assembly protein (NAP) 72 219 IPR002164 GO:0005634|GO:0006334
Vimu7g00789 267 Gene3D - 3 74 - -
Vimu7g00789 267 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 14 230 IPR002164 GO:0005634|GO:0006334
Vimu7g00789 267 SUPERFAMILY NAP-like 13 218 IPR037231 -
Vimu7g00789 267 Coils Coil 23 54 - -
Vimu7g00789 267 Gene3D Nucleosome assembly protein 75 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00789 Vimu-Chr7 7842192 7844821 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00789 K11290 - gmx:100810307 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00789 7 7842192 7844821 Vimu10g01029 10 9491010 9494444 ECH
Vimu7g00789 7 7842192 7844821 Vimu7g00789 7 7842192 7844821 ECH
Vimu10g01029 10 9491010 9494444 Vimu7g00789 7 7842192 7844821 PCT