Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01029 ATGGTGGCCGACAGGACCAAGAAGTTGAAGGTTTCCGAAAAGGGAGAGAACCTCGACGAAATCGACGGAGAACTTGTCCTTTCCATTGAGAAGTTGCAGGAGATCCAAGACGAGCTGGAAAAGATCAACGAAGAAGCCAGCGACAAAGTTCTCGAGATAGAGCAGAAGTACAATGAGATTAGGAAGCCCGTTTATGACAAGCGGAATGATATTATCAAGTCAATTCCTGATTTTTGGCTAACTGCTTTTTTGAGTCATCCTGCTCTTGGTGATCTTTTGAACGATGAAGATCAGAAGATATTTAAGTATTTGAGTTCTCTCGAGGTTGAAGATTTTAAAGATGTCAAATCAGGCTACTCAATCACCTTTAATTTCAACGCCAATCCCTATTTTGAAGATACAAAACTTGTAAAGACTTATACCTTCCTTGAGGAAGGAACAACAAAAGTCACTGCCACTCCCATAAAATGGAAGGAGGGCAAGGGCATACCTAATGGAGTTAGTCATGAGAAAAAAGGGAACAAGCGGGCTCCTGTTGATATCAGCTTCTTTAGTTGGTTTAACGACACTGAGCACAAAGATGAAATTGATGACATACATGATGAGGTTGCAGAATTAATCAAGGATGATTTATGGCCAAATCCGCTTACTTATTTCAATAATGAAGAAGCTGATGAAGATGAGGGTGATGAGGATGAAGCTGATGATGAGGTAACTGATGGGAAGGATGATGGTGACTCTGAAGATGATGATGATGAGGGTGAGGAGGATGACGATGAGGGGGAGGAAGATGATGGCAAATGA 804 0.4154 MVADRTKKLKVSEKGENLDEIDGELVLSIEKLQEIQDELEKINEEASDKVLEIEQKYNEIRKPVYDKRNDIIKSIPDFWLTAFLSHPALGDLLNDEDQKIFKYLSSLEVEDFKDVKSGYSITFNFNANPYFEDTKLVKTYTFLEEGTTKVTATPIKWKEGKGIPNGVSHEKKGNKRAPVDISFFSWFNDTEHKDEIDDIHDEVAELIKDDLWPNPLTYFNNEEADEDEGDEDEADDEVTDGKDDGDSEDDDDEGEEDDDEGEEDDGK 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01029 267 SUPERFAMILY NAP-like 7 220 IPR037231 -
Vimu10g01029 267 MobiDBLite consensus disorder prediction 213 267 - -
Vimu10g01029 267 Gene3D Nucleosome assembly protein 76 223 - -
Vimu10g01029 267 Coils Coil 25 59 - -
Vimu10g01029 267 Pfam Nucleosome assembly protein (NAP) 29 73 IPR002164 GO:0005634|GO:0006334
Vimu10g01029 267 Pfam Nucleosome assembly protein (NAP) 73 221 IPR002164 GO:0005634|GO:0006334
Vimu10g01029 267 MobiDBLite consensus disorder prediction 221 267 - -
Vimu10g01029 267 Gene3D - 1 75 - -
Vimu10g01029 267 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 14 248 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01029 Vimu-Chr10 9491010 9494444 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01029 K11290 - gmx:100793432 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00789 7 7842192 7844821 Vimu10g01029 10 9491010 9494444 ECH
Vimu10g01029 10 9491010 9494444 Vimu10g01029 10 9491010 9494444 ECH
Vimu10g01029 10 9491010 9494444 Vimu7g00789 7 7842192 7844821 PCT