Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00725 ATGTCGTCGTCACCGCAGAGCGTAAAGCAGAGAGTCTTCGCATGCCTGACCAAACTCTCCGACCGCGACACGCAGTCTCTCGCCGCTGCAGAACTCGAGTCCATCGCTCGGTGTCTCGATGCGGTCACCGTGCCAGCGTTCCTATCGTGCATGTACTCCACTGACGCGTCCGACAAGCCACCAGTCCGCAAGCAATGCGTGCAGCTGTTAGGATTCCTGGCGGAGACGCATGGCAACATGCTCGCACCGTACCTGTCTAAAATTATCGGCAGCATTGTGCGGCGCCTCCGCGACGCGGACTCGTCGGTGCGATCCGCGTGCGTGAGTTCGGTTGCGGCATTGTCGCGGCACGTCAGCAGGCAGCCGTTGCATTTGTTCGTGAAGCCGTTGGCGGAGGCGCTGTTCACGGAGCAGGACCAGAACGCGCAGGTCGGAGCCGCGCTGTGTCTCGCCGCCGCGATCGATGGAGCTCCGGATCCGGACCCGGCCAGGCTGGCGAAGCTCCTGCCGCGATTTGAAAAGCTTCTGAAGCGCGACGGGTTCAAGGCGAAGCCCGGGCTGTTGACGCTAGTGGGAAGCGTCGTCGCTTCCGGCGGCGCGTCCGGTCACGCGCCCTTGAAGAGTTTGGTCCCGTGCTTGGTAGAAGCGTTGAGCAGCGACGATTGGGCCACGCGGAAGGCTGCGGCGGAGACTCTCGTGGTGGTTGCCAACGTAGAGAGGAATTTCTTGTCGGAGTTCAAGGCCGAATGTGTGAGAGTTTTTGAAAATCGACGGTTTGATAAGGTAAAGTTAGTTCGGGACGTTATGAATCAGATGTTAGAAGCATGGAAGCAGATTCCTGATGTTTCCGATGAAGTTACGCCACCTCCTAAATCGCAACCTTCTTCTAAAGAGAATTCAAGTGATGGACGCAATCCTGCTGTCTCTCAAAATTCATGTAGTCCTGGTTCAGTGATGGCCAATCTGCGGAAGAAAAATACACCTTTTAGCAGATTCAGTCCAGCAGATAGTTCTTCTGCTAGCAGTGCCAAGACTAGGAGTGCTTCAAGTGGCAACAACAAGAGAATGAGTTCAATTGTTTCCCGAAAACTAAATCATAAGAATTGGGATACCCAAGTTGCTGTGGCTGATCAGGGAGGTCTTCAGGAGATGGATGGAATTGTTTTGGAAAGTAACAAAATGGATAAAAGCAGATTTTCAAAGCCAGAAATGAAAAGGGCACTGCTATATAGAGGTTCTGACGATAGAATACACAAGTATGGTGGGTCCAAAGCTGGATCTCGAGTGGTTCCATATCATGAAGAAAGTCAAGACTCAGTTCCTGTCAGTGATGTCTCTAAAGATCTGCATAGGAATGACAAAGAGAATGAAGATTTATCGCTGATCCGTGATCAGCTACATCAGATCGAGAAGCAGCAGTCAAGTTTACTCGATCTTCTGCAGAAATTTATGGGGAGCTCACAAAATGGAATGCGTTCTTTAGAGACTCGTGTGCATGGCCTTGAGTTGGCATTGGATGAGATCTCTTATGATTTGGCTATATCGAGTGGAAGGATGACTAAATCTGATGTTCATGGCAACACATGTTGCATGCTACCTGGAACAGAATTTTTGAGCTCCAAATTTTGGAGGAAAACACATGGTCGGCATTCAATCCCACGGTTCTCTAGATCAGGTGGCACTTCATCACTTGCTGCCACGAACTATCAAGCCGACAAGAATGGTGAAACCAAGTTGACAAACCATAGATTTAGGCCGGATGGAGGCTTCATCACTAATCCACTGGCAGAGATTCATGCAGATTCGAGGAATTTTGCTACATCGGAGCTAGTTTAA 1836 0.5065 MSSSPQSVKQRVFACLTKLSDRDTQSLAAAELESIARCLDAVTVPAFLSCMYSTDASDKPPVRKQCVQLLGFLAETHGNMLAPYLSKIIGSIVRRLRDADSSVRSACVSSVAALSRHVSRQPLHLFVKPLAEALFTEQDQNAQVGAALCLAAAIDGAPDPDPARLAKLLPRFEKLLKRDGFKAKPGLLTLVGSVVASGGASGHAPLKSLVPCLVEALSSDDWATRKAAAETLVVVANVERNFLSEFKAECVRVFENRRFDKVKLVRDVMNQMLEAWKQIPDVSDEVTPPPKSQPSSKENSSDGRNPAVSQNSCSPGSVMANLRKKNTPFSRFSPADSSSASSAKTRSASSGNNKRMSSIVSRKLNHKNWDTQVAVADQGGLQEMDGIVLESNKMDKSRFSKPEMKRALLYRGSDDRIHKYGGSKAGSRVVPYHEESQDSVPVSDVSKDLHRNDKENEDLSLIRDQLHQIEKQQSSLLDLLQKFMGSSQNGMRSLETRVHGLELALDEISYDLAISSGRMTKSDVHGNTCCMLPGTEFLSSKFWRKTHGRHSIPRFSRSGGTSSLAATNYQADKNGETKLTNHRFRPDGGFITNPLAEIHADSRNFATSELV 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00725 611 FunFam TORTIFOLIA1-like protein 3 isoform A 1 358 - -
Vimu7g00725 611 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 579 IPR033337 GO:0005874|GO:0008017
Vimu7g00725 611 MobiDBLite consensus disorder prediction 420 447 - -
Vimu7g00725 611 SUPERFAMILY ARM repeat 9 270 IPR016024 -
Vimu7g00725 611 MobiDBLite consensus disorder prediction 280 363 - -
Vimu7g00725 611 Coils Coil 452 472 - -
Vimu7g00725 611 Gene3D - 2 377 IPR011989 -
Vimu7g00725 611 Pfam HEAT repeat 209 236 IPR000357 GO:0005515
Vimu7g00725 611 MobiDBLite consensus disorder prediction 288 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00725 Vimu-Chr7 7252953 7255535 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00725 - - gmx:100789197 964.526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00725 7 7252953 7255535 Vimu10g01140 10 10985418 10990488 PCT