Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00678 ATGTTCAATAAGCCAAGTAAGCTGGAACTGCCAAGTAACCGGGAGAGCAGAAAACGCGAAGCAAAATTTGAAGAATCGAACCCACGTGGCAGGGACCCACAGAAAACCCCGAAGCGGAAAAATCCTACTTTGTTTTTCACTTTCTCCCACCCAAACACTCTTCTCCTTTATTCCCATTTTTTTTCCTCTTTAAATTCCGCCACCACTCTTTTCACCAACGCCGTGCCCTCTATGAAGAACTCCGACCCCTCCGCCCACTTCGAATCGCCTCACTCCCCTCTCCGCTTCCGATCCTCCCCGCTCTCCGACAACGGCGACCCCTCCTTCCACTCGCCCGAAAACTCGCCGATAAATGACCACCGAGACAACTCCAGGGCCATCGTCATCGTCGAGACTTCCACGCAGTTCGCCCAGGCAGCGCCCCCCGTCACCGAGTCCGAGCACCGCAACCCACCGCCCAATGAGCTGCCGGAGGTCGTGGTCACCCGCCCCGCGCGCCCGGAGCCTCGCTCGCCAGCGGCGGCCCACCGCGGCAGGACAAGAGCGGTGCCGCCCCCTACCCTTTCAGTGCCGAAAAGAGAGGTTATGTTGAAAAAGGTGGCGTTAGGGTTCAGGTTGAGCGAGGTGGTGCTGTGTCTGATTTCGTTTTCGGTTATGGCCGCGGACAAGACCCGTGGTTGGAGCGGCGACTCTTTTGATCGCTACAAGGAATACAGGTATTGTTTATCGGTGAATGTTATCGCATTTGTATACGCAGCGTTTCAAAGCTGTGATCTGGCATATCAAGTAGTGGCAGGGAGAAGCATAATAAATCACCACCTGCGTTACCATTTTGATTTCTTCATGGATCAGGCAATTCTCAAAACAGTTCTAGCGTATCTTCTGATATCGTCTGCATCTTCTGCAGCCACACGTGTAGATGACTGGCAATCCAATTGGGGAAAAGACGACTTCACTGAGATGGCCAGTGCTTCCATTGCGTTGGCCTTTCTTGCTTTCATTGCCTTTGCTATTAGCTCCTTAATCTCTGGCTACAACCTCTGCACTCTCTTCTCCTAA 1059 0.5307 MFNKPSKLELPSNRESRKREAKFEESNPRGRDPQKTPKRKNPTLFFTFSHPNTLLLYSHFFSSLNSATTLFTNAVPSMKNSDPSAHFESPHSPLRFRSSPLSDNGDPSFHSPENSPINDHRDNSRAIVIVETSTQFAQAAPPVTESEHRNPPPNELPEVVVTRPARPEPRSPAAAHRGRTRAVPPPTLSVPKREVMLKKVALGFRLSEVVLCLISFSVMAADKTRGWSGDSFDRYKEYRYCLSVNVIAFVYAAFQSCDLAYQVVAGRSIINHHLRYHFDFFMDQAILKTVLAYLLISSASSAATRVDDWQSNWGKDDFTEMASASIALAFLAFIAFAISSLISGYNLCTLFS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00678 352 MobiDBLite consensus disorder prediction 10 38 - -
Vimu7g00678 352 PANTHER CASP-LIKE PROTEIN 4A4 175 348 - -
Vimu7g00678 352 MobiDBLite consensus disorder prediction 137 187 - -
Vimu7g00678 352 Pfam Casparian strip membrane protein domain 197 335 IPR006702 -
Vimu7g00678 352 MobiDBLite consensus disorder prediction 78 121 - -
Vimu7g00678 352 MobiDBLite consensus disorder prediction 95 114 - -
Vimu7g00678 352 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00678 Vimu-Chr7 6763547 6765029 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00678 - - gmx:100812568 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00678 7 6763547 6765029 Vimu10g01217 10 12063082 12064518 ECH
Vimu7g00678 7 6763547 6765029 Vimu7g00678 7 6763547 6765029 ECH
Vimu7g00678 7 6763547 6765029 Vimu10g01217 10 12063082 12064518 PCT